Ictalurus punctatus (channel catfish): 108258713
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Entry
108258713 CDS
T04658
Symbol
zgc:65894
Name
(RefSeq) tubulin beta-4B chain
KO
K07375
tubulin beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
ipu04540
Gap junction
ipu04814
Motor proteins
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108258713 (zgc:65894)
09144 Cellular community - eukaryotes
04540 Gap junction
108258713 (zgc:65894)
09142 Cell motility
04814 Motor proteins
108258713 (zgc:65894)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108258713 (zgc:65894)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108258713 (zgc:65894)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108258713 (zgc:65894)
04147 Exosome [BR:
ipu04147
]
108258713 (zgc:65894)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
108258713 (zgc:65894)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
108258713 (zgc:65894)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108258713 (zgc:65894)
Exosomal proteins of colorectal cancer cells
108258713 (zgc:65894)
Exosomal proteins of bladder cancer cells
108258713 (zgc:65894)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
108258713
NCBI-ProteinID:
XP_017313031
UniProt:
A0A2D0Q5Q4
LinkDB
All DBs
Position
26:complement(18851959..18859179)
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEASGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEGEFEEEGEEEAA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgttcacctgcaggcgggacagtgtggaaaccagatcggagccaagttc
tgggaggtgatcagtgatgagcatggcattgatcccactggaacctatcacggagacagc
gacctgcagctggaccgcatcagcgtctattacaatgaagcctcaggagggaagtatgtt
cctcgtgccatcttggtggatctggaaccaggaaccatggactcggttcgatctggacct
ttcggacagatcttcagacccgacaactttgtctttggccagagtggtgctgggaataac
tgggccaagggccactacacagagggagccgagttagtggactccgtcctggatgtggtg
cgtaaggaggctgagagctgcgactgtctgcagggtttccagctcacccactctctgggc
ggtggcaccggctctggcatgggcacgctgctaatcagcaagattcgtgaagaatatccc
gaccgtatcatgaacaccttcagtgtggtgccctcgcccaaagtgtctgatacagtggtt
gaaccctacaacgccacgctgtctgtgcaccagctggtggagaacactgacgagacctac
tgcatcgacaacgaagctctgtatgacatctgcttccgtacgctcaaactgaccacaccc
acttacggtgatctgaaccacctggtctcggccaccatgagtggagtcacgacttgcctc
cgcttcccggggcagctgaatgcagatttgcgcaagctggccgtcaacatggtgccgttc
ccacgtctccacttcttcatgcctggttttgcacccttgaccagcagggggagtcagcag
taccgcgccctttccgtccctgaactgacacagcagatgttcgacgcgaagaacatgatg
gctgcctgtgacccgcgtcatggccgttacctcaccgttgcggccgtgttccgtggacgc
atgtccatgaaggaggtcgacgagcagatgctcaacgtccaaaacaagaacagcagctac
ttcgtggaatggatccccaacaacgtcaaaacggccgtgtgcgacatcccgccgcgtggc
ctcaagatggccgccaccttcatcggcaacagcacggccatccaggagctgttcaagcgc
atctctgagcagttcactgccatgttcaggagaaaggccttcctccactggtacacagga
gaaggaatggatgagatggagtttaccgaggctgagagcaacatgaacgacctggtctct
gagtaccagcagtaccaggatgctaccgccgaggagggagagttcgaggaagagggtgaa
gaagaggctgcctaa
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