Ictalurus punctatus (channel catfish): 108258736
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Entry
108258736 CDS
T04658
Name
(RefSeq) proto-oncogene vav
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108258736
09142 Cell motility
04810 Regulation of actin cytoskeleton
108258736
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
SH3_9
CH
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
C1_2
PH_10
PH_5
LZ3wCH
PXA
Motif
Other DBs
NCBI-GeneID:
108258736
NCBI-ProteinID:
XP_017313088
Ensembl:
ENSIPUG00000011261
UniProt:
A0A2D0Q2Y3
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All DBs
Position
26:19741292..19767667
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AA seq
846 aa
AA seq
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MELWRQCASWLIQCRVLPENHRVTWDSAQVCELAQALRDGVLLCHLLNNLLPHSVNLREI
NLRPQMSQFLCLKNIRTFLTVCHERFGMKKNELFEAFDLFDVRDFGKVIETLSILSQTSV
AVQRGYRPFPNEVCVGDDDIYNGLSDQMDDTVDEDDDLYDCVEDEENEGDDIYEDLMRTE
ETPEIQQKCEVDKRGCCLQEISQTEEKYTQTLESILQHFMRPLQAFLGPADLENIFMNVE
ELADTHRRLLREVQTSISSYGAENLHQVFIDYKEKLLLYGRYCSQVESATKQLDKISSAR
EDVRMKLEECSMRANSGRFSLRDLLMVPMQRVLKYHLLLQELVKHTVNPSDKDNLRTALD
AMRDLAQCVNEVKRDNEIIRQITAFQLCIENMTQSLALFGRPKIDGELKICTPDKKSKQD
RYAFLFDKALLVCKKRSGENMELKDLIDLQHFQLRDEPTGDKENKKWSHTFLLMDSYGQG
GYDLYFKTRELKKKWLEQFEMALSNMCPENCTANGHDFQMHCFEDTTSCKACQMLLRGIF
YQGYRCSRCKMAAHKECLGRVPMCGRNAENSVTVKKSKSRAATQRQTKPGFPKMEVCHDY
YAVPPPPVAFGQPLHLTVGDVIELTRADVDLQWWEGRNLTVGEVGWFPCSKVQPFLPRPP
PDLTGLPWYAGNMDRSEAKSLLISRSDGTFLIRQKDGGEFAISIKFNMDIRHIKITLAEG
LYRINDKKAFKGLIELVHYYQENSLKECFKDVDTRLLIPHKQPEQSVSSHSHTHTPTRGM
SERYFGTAKVRYDFSARDRTELSLREGDTVKIISKKAHNGWWKGEVYGRVGLFPANYVEE
EHSDYC
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtggaggcagtgcgcatcgtggctgattcaatgccgagttcttcctgagaac
cacagagtgacctgggacagcgcacaggtgtgtgagttagcccaggcactcagagatgga
gttcttctgtgtcacctgctgaataatctcctccctcactccgtcaacctgcgggagatc
aacctgcgtccccagatgtctcagttcctgtgtctaaagaacatcaggacatttctaact
gtgtgtcacgagcgctttgggatgaagaagaatgaactgtttgaggccttcgaccttttt
gatgtcagagattttggcaaggtgattgaaacgctgtccatcctctctcagacgtccgta
gctgttcagagaggctacaggccgtttcctaacgaagtgtgtgttggagacgacgacatc
tacaacggcctctctgaccagatggatgacacagtggacgaggatgatgatctgtatgac
tgtgtggaggatgaagagaatgagggagacgacatttacgaagacctgatgagaacagag
gaaacaccagagatacaacagaaatgtgaagtggacaagagaggctgctgccttcaggag
atcagtcagactgaggaaaaatacacacagaccctggagtctatactacagcactttatg
aggccactgcaggctttccttgggccagctgacttagagaacatcttcatgaatgtagag
gagttagctgatacacaccgtcgtctactgagagaggtccagacgtcaatatcctcttac
ggagcagagaatcttcaccaggtcttcatcgattacaaagagaagttgttgttgtacgga
cgatactgcagtcaggtcgaatcagcaacgaaacaactggataaaatctccagcgcgagg
gaagatgtccggatgaagctggaggagtgctcgatgagggcgaacagcggccgcttctct
ctcagagacctgctgatggtgcctatgcagagggtgttaaagtatcacttgctgctgcag
gaactcgtgaagcacacagtgaatccaagtgataaggacaacctacgcactgcactagat
gccatgagggatcttgcgcagtgtgtgaacgaggtgaagagggataacgagattattcgt
cagatcacagccttccagctctgtatcgagaacatgactcagtccctcgcactttttggc
cgcccgaagatcgatggagagctgaagatctgcacccctgacaagaaatccaagcaagac
aggtatgcatttctcttcgataaagccctactggtgtgtaagaagcgcagtggggagaac
atggagctgaaagatctcatcgacctgcagcatttccagctgagagacgaaccaaccgga
gacaaagaaaacaaaaagtggtcacataccttcttgctgatggattcgtatggtcaaggt
ggttatgatctgtacttcaagacacgtgagctgaagaagaaatggctagaacagttcgag
atggctctgtccaacatgtgtccagagaactgcacggcgaatggccacgacttccaaatg
cactgttttgaggacaccacttcctgtaaagcctgtcagatgttgctcagagggatcttc
taccagggttaccgctgcagccgttgtaaaatggccgcccataaggagtgtctgggacga
gttcccatgtgtggacgcaatgcagaaaactctgtgactgtgaaaaagagcaagtcgaga
gctgccactcagagacagaccaaaccaggttttcctaagatggaggtgtgccatgattac
tatgccgtgcctccgccccctgtggctttcggccaaccactccatctcactgtgggtgat
gtcatcgagctcacgcgcgctgacgttgacttgcagtggtgggagggcaggaatctgacg
gtaggcgaggttggctggttcccctgcagtaaagttcaacccttcttaccgagaccacct
cctgacctcacaggactcccctggtatgcgggtaacatggaccgttctgaggccaagagt
ctcctgatatctcgatctgatggtacattcctgattaggcaaaaggatggaggagagttc
gccatcagcatcaagtttaacatggacatccgccatattaagatcactctggctgaaggt
ctctacagaataaatgacaagaaagcctttaaagggctcattgaattggttcattattat
caggagaattctctgaaggagtgttttaaagacgtggacactcgtctgctgattccacac
aagcaaccggagcagagtgtgtcctcacactcacacacacacacacctaccagaggtatg
agtgagcgatattttggcacagctaaagtgcgctacgatttctcagcgcgggatcggacc
gagctttctctcagagaaggggacacggtgaagatcatctctaagaaagcacacaatggc
tggtggaaaggagaggtctacggccgggtcggactgtttcctgcaaattacgtagaggag
gaacattcggactactgctga
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