KEGG   Ictalurus punctatus (channel catfish): 108258736
Entry
108258736         CDS       T04658                                 
Name
(RefSeq) proto-oncogene vav
  KO
K05730  guanine nucleotide exchange factor VAV
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04510  Focal adhesion
ipu04517  IgSF CAM signaling
ipu04519  Cadherin signaling
ipu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108258736
   04519 Cadherin signaling
    108258736
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108258736
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108258736
SSDB
Motif
Pfam: RhoGEF SH3_2 CAMSAP_CH SH3_1 SH3_9 CH SH2 SOS1_NGEF_PH C1_1 PH RHG20_PH CDC24 C1_2 PH_10 PH_5 DUF6079_5th LZ3wCH PXA
Other DBs
NCBI-GeneID: 108258736
NCBI-ProteinID: XP_017313088
Ensembl: ENSIPUG00000011261
UniProt: A0A2D0Q2Y3
LinkDB
Position
26:19741292..19767667
AA seq 846 aa
MELWRQCASWLIQCRVLPENHRVTWDSAQVCELAQALRDGVLLCHLLNNLLPHSVNLREI
NLRPQMSQFLCLKNIRTFLTVCHERFGMKKNELFEAFDLFDVRDFGKVIETLSILSQTSV
AVQRGYRPFPNEVCVGDDDIYNGLSDQMDDTVDEDDDLYDCVEDEENEGDDIYEDLMRTE
ETPEIQQKCEVDKRGCCLQEISQTEEKYTQTLESILQHFMRPLQAFLGPADLENIFMNVE
ELADTHRRLLREVQTSISSYGAENLHQVFIDYKEKLLLYGRYCSQVESATKQLDKISSAR
EDVRMKLEECSMRANSGRFSLRDLLMVPMQRVLKYHLLLQELVKHTVNPSDKDNLRTALD
AMRDLAQCVNEVKRDNEIIRQITAFQLCIENMTQSLALFGRPKIDGELKICTPDKKSKQD
RYAFLFDKALLVCKKRSGENMELKDLIDLQHFQLRDEPTGDKENKKWSHTFLLMDSYGQG
GYDLYFKTRELKKKWLEQFEMALSNMCPENCTANGHDFQMHCFEDTTSCKACQMLLRGIF
YQGYRCSRCKMAAHKECLGRVPMCGRNAENSVTVKKSKSRAATQRQTKPGFPKMEVCHDY
YAVPPPPVAFGQPLHLTVGDVIELTRADVDLQWWEGRNLTVGEVGWFPCSKVQPFLPRPP
PDLTGLPWYAGNMDRSEAKSLLISRSDGTFLIRQKDGGEFAISIKFNMDIRHIKITLAEG
LYRINDKKAFKGLIELVHYYQENSLKECFKDVDTRLLIPHKQPEQSVSSHSHTHTPTRGM
SERYFGTAKVRYDFSARDRTELSLREGDTVKIISKKAHNGWWKGEVYGRVGLFPANYVEE
EHSDYC
NT seq 2541 nt   +upstreamnt  +downstreamnt
atggagttgtggaggcagtgcgcatcgtggctgattcaatgccgagttcttcctgagaac
cacagagtgacctgggacagcgcacaggtgtgtgagttagcccaggcactcagagatgga
gttcttctgtgtcacctgctgaataatctcctccctcactccgtcaacctgcgggagatc
aacctgcgtccccagatgtctcagttcctgtgtctaaagaacatcaggacatttctaact
gtgtgtcacgagcgctttgggatgaagaagaatgaactgtttgaggccttcgaccttttt
gatgtcagagattttggcaaggtgattgaaacgctgtccatcctctctcagacgtccgta
gctgttcagagaggctacaggccgtttcctaacgaagtgtgtgttggagacgacgacatc
tacaacggcctctctgaccagatggatgacacagtggacgaggatgatgatctgtatgac
tgtgtggaggatgaagagaatgagggagacgacatttacgaagacctgatgagaacagag
gaaacaccagagatacaacagaaatgtgaagtggacaagagaggctgctgccttcaggag
atcagtcagactgaggaaaaatacacacagaccctggagtctatactacagcactttatg
aggccactgcaggctttccttgggccagctgacttagagaacatcttcatgaatgtagag
gagttagctgatacacaccgtcgtctactgagagaggtccagacgtcaatatcctcttac
ggagcagagaatcttcaccaggtcttcatcgattacaaagagaagttgttgttgtacgga
cgatactgcagtcaggtcgaatcagcaacgaaacaactggataaaatctccagcgcgagg
gaagatgtccggatgaagctggaggagtgctcgatgagggcgaacagcggccgcttctct
ctcagagacctgctgatggtgcctatgcagagggtgttaaagtatcacttgctgctgcag
gaactcgtgaagcacacagtgaatccaagtgataaggacaacctacgcactgcactagat
gccatgagggatcttgcgcagtgtgtgaacgaggtgaagagggataacgagattattcgt
cagatcacagccttccagctctgtatcgagaacatgactcagtccctcgcactttttggc
cgcccgaagatcgatggagagctgaagatctgcacccctgacaagaaatccaagcaagac
aggtatgcatttctcttcgataaagccctactggtgtgtaagaagcgcagtggggagaac
atggagctgaaagatctcatcgacctgcagcatttccagctgagagacgaaccaaccgga
gacaaagaaaacaaaaagtggtcacataccttcttgctgatggattcgtatggtcaaggt
ggttatgatctgtacttcaagacacgtgagctgaagaagaaatggctagaacagttcgag
atggctctgtccaacatgtgtccagagaactgcacggcgaatggccacgacttccaaatg
cactgttttgaggacaccacttcctgtaaagcctgtcagatgttgctcagagggatcttc
taccagggttaccgctgcagccgttgtaaaatggccgcccataaggagtgtctgggacga
gttcccatgtgtggacgcaatgcagaaaactctgtgactgtgaaaaagagcaagtcgaga
gctgccactcagagacagaccaaaccaggttttcctaagatggaggtgtgccatgattac
tatgccgtgcctccgccccctgtggctttcggccaaccactccatctcactgtgggtgat
gtcatcgagctcacgcgcgctgacgttgacttgcagtggtgggagggcaggaatctgacg
gtaggcgaggttggctggttcccctgcagtaaagttcaacccttcttaccgagaccacct
cctgacctcacaggactcccctggtatgcgggtaacatggaccgttctgaggccaagagt
ctcctgatatctcgatctgatggtacattcctgattaggcaaaaggatggaggagagttc
gccatcagcatcaagtttaacatggacatccgccatattaagatcactctggctgaaggt
ctctacagaataaatgacaagaaagcctttaaagggctcattgaattggttcattattat
caggagaattctctgaaggagtgttttaaagacgtggacactcgtctgctgattccacac
aagcaaccggagcagagtgtgtcctcacactcacacacacacacacctaccagaggtatg
agtgagcgatattttggcacagctaaagtgcgctacgatttctcagcgcgggatcggacc
gagctttctctcagagaaggggacacggtgaagatcatctctaagaaagcacacaatggc
tggtggaaaggagaggtctacggccgggtcggactgtttcctgcaaattacgtagaggag
gaacattcggactactgctga

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