Ictalurus punctatus (channel catfish): 108258736
Help
Entry
108258736 CDS
T04658
Name
(RefSeq) proto-oncogene vav
KO
K05730
guanine nucleotide exchange factor VAV
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04517
IgSF CAM signaling
ipu04519
Cadherin signaling
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108258736
04519 Cadherin signaling
108258736
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108258736
09142 Cell motility
04810 Regulation of actin cytoskeleton
108258736
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
SH3_9
CH
SH2
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
C1_2
PH_10
PH_5
DUF6079_5th
LZ3wCH
PXA
Motif
Other DBs
NCBI-GeneID:
108258736
NCBI-ProteinID:
XP_017313088
Ensembl:
ENSIPUG00000011261
UniProt:
A0A2D0Q2Y3
LinkDB
All DBs
Position
26:19741292..19767667
Genome browser
AA seq
846 aa
AA seq
DB search
MELWRQCASWLIQCRVLPENHRVTWDSAQVCELAQALRDGVLLCHLLNNLLPHSVNLREI
NLRPQMSQFLCLKNIRTFLTVCHERFGMKKNELFEAFDLFDVRDFGKVIETLSILSQTSV
AVQRGYRPFPNEVCVGDDDIYNGLSDQMDDTVDEDDDLYDCVEDEENEGDDIYEDLMRTE
ETPEIQQKCEVDKRGCCLQEISQTEEKYTQTLESILQHFMRPLQAFLGPADLENIFMNVE
ELADTHRRLLREVQTSISSYGAENLHQVFIDYKEKLLLYGRYCSQVESATKQLDKISSAR
EDVRMKLEECSMRANSGRFSLRDLLMVPMQRVLKYHLLLQELVKHTVNPSDKDNLRTALD
AMRDLAQCVNEVKRDNEIIRQITAFQLCIENMTQSLALFGRPKIDGELKICTPDKKSKQD
RYAFLFDKALLVCKKRSGENMELKDLIDLQHFQLRDEPTGDKENKKWSHTFLLMDSYGQG
GYDLYFKTRELKKKWLEQFEMALSNMCPENCTANGHDFQMHCFEDTTSCKACQMLLRGIF
YQGYRCSRCKMAAHKECLGRVPMCGRNAENSVTVKKSKSRAATQRQTKPGFPKMEVCHDY
YAVPPPPVAFGQPLHLTVGDVIELTRADVDLQWWEGRNLTVGEVGWFPCSKVQPFLPRPP
PDLTGLPWYAGNMDRSEAKSLLISRSDGTFLIRQKDGGEFAISIKFNMDIRHIKITLAEG
LYRINDKKAFKGLIELVHYYQENSLKECFKDVDTRLLIPHKQPEQSVSSHSHTHTPTRGM
SERYFGTAKVRYDFSARDRTELSLREGDTVKIISKKAHNGWWKGEVYGRVGLFPANYVEE
EHSDYC
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtggaggcagtgcgcatcgtggctgattcaatgccgagttcttcctgagaac
cacagagtgacctgggacagcgcacaggtgtgtgagttagcccaggcactcagagatgga
gttcttctgtgtcacctgctgaataatctcctccctcactccgtcaacctgcgggagatc
aacctgcgtccccagatgtctcagttcctgtgtctaaagaacatcaggacatttctaact
gtgtgtcacgagcgctttgggatgaagaagaatgaactgtttgaggccttcgaccttttt
gatgtcagagattttggcaaggtgattgaaacgctgtccatcctctctcagacgtccgta
gctgttcagagaggctacaggccgtttcctaacgaagtgtgtgttggagacgacgacatc
tacaacggcctctctgaccagatggatgacacagtggacgaggatgatgatctgtatgac
tgtgtggaggatgaagagaatgagggagacgacatttacgaagacctgatgagaacagag
gaaacaccagagatacaacagaaatgtgaagtggacaagagaggctgctgccttcaggag
atcagtcagactgaggaaaaatacacacagaccctggagtctatactacagcactttatg
aggccactgcaggctttccttgggccagctgacttagagaacatcttcatgaatgtagag
gagttagctgatacacaccgtcgtctactgagagaggtccagacgtcaatatcctcttac
ggagcagagaatcttcaccaggtcttcatcgattacaaagagaagttgttgttgtacgga
cgatactgcagtcaggtcgaatcagcaacgaaacaactggataaaatctccagcgcgagg
gaagatgtccggatgaagctggaggagtgctcgatgagggcgaacagcggccgcttctct
ctcagagacctgctgatggtgcctatgcagagggtgttaaagtatcacttgctgctgcag
gaactcgtgaagcacacagtgaatccaagtgataaggacaacctacgcactgcactagat
gccatgagggatcttgcgcagtgtgtgaacgaggtgaagagggataacgagattattcgt
cagatcacagccttccagctctgtatcgagaacatgactcagtccctcgcactttttggc
cgcccgaagatcgatggagagctgaagatctgcacccctgacaagaaatccaagcaagac
aggtatgcatttctcttcgataaagccctactggtgtgtaagaagcgcagtggggagaac
atggagctgaaagatctcatcgacctgcagcatttccagctgagagacgaaccaaccgga
gacaaagaaaacaaaaagtggtcacataccttcttgctgatggattcgtatggtcaaggt
ggttatgatctgtacttcaagacacgtgagctgaagaagaaatggctagaacagttcgag
atggctctgtccaacatgtgtccagagaactgcacggcgaatggccacgacttccaaatg
cactgttttgaggacaccacttcctgtaaagcctgtcagatgttgctcagagggatcttc
taccagggttaccgctgcagccgttgtaaaatggccgcccataaggagtgtctgggacga
gttcccatgtgtggacgcaatgcagaaaactctgtgactgtgaaaaagagcaagtcgaga
gctgccactcagagacagaccaaaccaggttttcctaagatggaggtgtgccatgattac
tatgccgtgcctccgccccctgtggctttcggccaaccactccatctcactgtgggtgat
gtcatcgagctcacgcgcgctgacgttgacttgcagtggtgggagggcaggaatctgacg
gtaggcgaggttggctggttcccctgcagtaaagttcaacccttcttaccgagaccacct
cctgacctcacaggactcccctggtatgcgggtaacatggaccgttctgaggccaagagt
ctcctgatatctcgatctgatggtacattcctgattaggcaaaaggatggaggagagttc
gccatcagcatcaagtttaacatggacatccgccatattaagatcactctggctgaaggt
ctctacagaataaatgacaagaaagcctttaaagggctcattgaattggttcattattat
caggagaattctctgaaggagtgttttaaagacgtggacactcgtctgctgattccacac
aagcaaccggagcagagtgtgtcctcacactcacacacacacacacctaccagaggtatg
agtgagcgatattttggcacagctaaagtgcgctacgatttctcagcgcgggatcggacc
gagctttctctcagagaaggggacacggtgaagatcatctctaagaaagcacacaatggc
tggtggaaaggagaggtctacggccgggtcggactgtttcctgcaaattacgtagaggag
gaacattcggactactgctga
DBGET
integrated database retrieval system