Ictalurus punctatus (channel catfish): 108258751
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Entry
108258751 CDS
T04658
Name
(RefSeq) putative leucine-rich repeat-containing protein DDB_G0290503 isoform X2
Organism
ipu
Ictalurus punctatus (channel catfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
ATG16
KASH_CCD
ATG17_like
YabA
Sec8_N
TraE
Fez1
Crescentin
Motif
Other DBs
NCBI-GeneID:
108258751
NCBI-ProteinID:
XP_017313118
UniProt:
A0A2D0Q314
LinkDB
All DBs
Position
26:complement(20104894..20131608)
Genome browser
AA seq
1235 aa
AA seq
DB search
MAWIQLLLFSCLSLTPLTTLSHTVFVDDIDVDVVDDDEDDDDDGIICKGIDEELNSCNMK
LTEKTDYSFNIEKDLFALKDQLRMIKLSCINASQASSVQVAALQNQLDNMLKQLGEKALG
PAGAVLNILQEYVKAQKLELDLLVETDPKKIAEMQEQLKKSRADLEALGGNLNQLECQTA
NNSQQFEEELSKESERISELLGRNKYLEEKISDTQAECSDLQENYNELVDKLELTGTDST
MKSILDIVSLDIGINNLEDRIRSETSESKRTELEKELREKKEQLESKKKELQTSDDLNTR
IILTILSKLEEMRKLQSQILDGDSLDQIKEKKEEVLRLLSELDDSNLAKTVLKNLVLLSD
ETHLKKLISNIKQKADKQIAELQEEVRKKEEELKRKTTELGKKDSDVATLTKEVRDLREE
LKNLTKQVRDVENASASRLGELEKQLKETRQELEEGNKALQEKDADLAKKVIKITELLEE
LRQTKEEANRRNQEAANRITDLEGKLKKEEGENKNLRDALKEATECADLKKSYNRLKADF
DKTVSKLNDTLINQVFTIEALKQDIKKLEDEVSSAEGNVEELNQRLQEKKAELEEAKNKI
KKHRGESLKFLKLLEELRKVNRKQEEHIQEYLVEINRLEKDMEEMLARLSATGNEKSKLA
IQVIFLKEEVSQLTKGLAGLRKEHQEKTAGLEEEIEEKNKEIAYLKRSGCVYQISDLQQE
LRVKQQELEQLKRENSAQIRELQKKLTEKTRKLEETAVELKDRDSENANLINQLTDLNEQ
LNKALEDRKEGSETAQKRISELKEQLKKKEQELSHLSDSNAECEEQLKQKQKQVSDLNNE
NAELEEQLKKKGKELSKLENNNAELEEQLKKKEKELSNLKNNNADLEEQLKQKDKELSDL
KNNNAGVNDERERLQKEVKRLKEQVKAAEQLEEQLKQKERELSKLKNSNAELEEQLKQKE
KELSNLKNNNADVINENERLRGDVKRLNNRVKVLENSEEQLKQKEKEISDLKKNNAKVID
ENKRLQVDVMKLKERVKELEGPVTVKPPTVTIMSLEFDPQTAHRRLLISADERSVRGVQY
TIARYDSPRRYDTAIAALTKTGFNSGRPYWEVQVKDRSCFVVGVAAESAPRKGEIRYRPS
NGYWTIQKENGQHYMLAEHPVRLRLSDKLNIIGILIDFSSGEVVFYNAQTRAVLYTFSRN
KFTQKLYPYVATCGSEGPEDWPIELLDTALVPWLN
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggattcagcttctcctcttctcttgtctctccttgactcctctcactacactg
tctcacactgtatttgtggatgatatagatgttgatgttgttgatgatgatgaagatgat
gatgatgatgggattatctgtaagggcattgatgaggaactgaacagctgcaatatgaaa
ctgactgagaaaacggattacagctttaacatcgagaaagatctgtttgctctgaaggac
cagctgaggatgatcaagctgtcatgtataaacgcttctcaggcgtcctcagtgcaggtc
gcagctctgcagaaccagctggacaacatgctaaagcagcttggggaaaaagccttggga
cctgctggagccgtgttaaacatcctgcaggagtatgtgaaagctcagaagctcgagttg
gaccttttagtggagacggatccaaaaaagattgcagagatgcaggaacaactgaaaaag
tcaagagctgatctggaggcactgggtggaaacctcaaccagctagagtgccaaacagcg
aacaacagccaacaatttgaggaggagctgagtaaggaatcagaaaggatttcagaattg
ctcggccgcaataagtatttggaggagaagatttctgacacacaggcagaatgcagcgac
cttcaggaaaattacaacgaattagtggacaagttggaattgactggaactgattcaacc
atgaagtcgattctggacattgtgtctctggacattggcatcaacaacctcgaggacaga
atccgatccgagacgtccgagtccaagagaaccgaactggagaaagagctgagagagaag
aaggaacaactcgagtcgaagaagaaggaactgcagaccagtgacgatctgaacaccaga
ataattctgaccatactctccaagttggaggagatgaggaagcttcagagtcagatcctg
gatggagacagtttggaccaaatcaaagagaagaaagaggaagtgctcagattgctctct
gaactggacgactcgaacctggccaaaaccgtgctgaagaacttggtcttgctgtcggat
gagactcacctaaagaaactcatatcaaacatcaaacagaaggcggacaaacagatagca
gaactgcaggaggaagtgaggaagaaggaggaggagctgaagaggaaaaccacagaactg
ggaaagaaggacagtgacgtagccacactgactaaagaggtcagggatttgagggaggaa
ctgaagaaccttaccaaacaagtgagagacgtggagaacgcttcggcatcacggctcgga
gaactggagaagcagctgaaggagacgaggcaggagctggaggaagggaacaaggctctg
caggagaaggatgcagacttagcaaagaaagtgataaagatcacggagctccttgaggaa
ctgagacagactaaagaggaagccaacaggagaaaccaggaggctgcaaacaggatcaca
gatctggagggaaagctgaagaaggaagagggggaaaataaaaatttgcgggatgcactg
aaggaggccacagagtgcgctgacctcaagaaatcttacaaccgactgaaggctgatttt
gataaaacagtttctaagctgaatgatacactgattaatcaagtgtttacaatcgaagct
ctcaagcaggacataaagaaactggaggatgaagtcagttcagcagaaggaaatgttgaa
gagctgaatcagagactgcaggagaagaaagcggagctcgaggaggccaagaataagata
aagaagcatagaggagaatctctcaaatttctgaaattactcgaggagctgaggaaggtg
aacaggaagcaggaggaacacatccaggagtatttagttgagattaaccgactggagaag
gacatggaggagatgttggctcgactctcagccaccggaaacgagaaatctaaactggcc
atccaggtgatctttctaaaggaggaggtgtcccagttaactaaagggcttgcaggactt
agaaaggagcaccaggagaagactgcaggtttggaggaggagatagaagagaagaataaa
gagattgcgtacctaaagagaagcggctgtgtttatcagatatctgatctgcagcaggag
ctgagggtgaaacagcaggaactggaacagctgaagagagagaattctgcacagatcagg
gagctgcagaagaagctaaccgagaagacccgcaaactggaggagactgccgtggagctg
aaggaccgcgactcggaaaacgctaatctgatcaaccaattaacggatctgaatgaacag
ttgaacaaagcattggaagacagaaaggaaggcagtgagaccgcacagaaacggatctcc
gaacttaaagagcagctgaagaaaaaggagcaggagctttcacacctgagtgacagtaac
gcagaatgtgaagagcagctgaagcagaagcagaagcaagtttcagacctgaataacgag
aacgctgaacttgaagaacagctgaagaaaaaggggaaggaactttctaagctggagaac
aataacgcagagcttgaagaacagctgaagaaaaaggaaaaggaactttctaacctgaag
aacaacaacgcagatcttgaagagcagctgaagcaaaaggacaaggaactttccgacctg
aagaacaataacgcaggtgtgaatgatgagagagagcgtctgcaaaaagaagtcaagaga
ctgaaagagcaagtaaaggcagcagagcaacttgaagagcagctgaagcaaaaggagagg
gaactttcaaagctgaagaacagtaacgcagaacttgaagaacagctgaagcaaaaggag
aaggaactttccaacctgaagaacaataacgcagatgtgattaatgagaacgagcgtctg
agaggagatgtgaagagactgaacaaccgagtgaaagtcctagagaacagtgaagagcag
ctgaagcaaaaggagaaggaaatttcagacctaaagaaaaataacgcaaaggttatcgat
gagaacaagcgtctgcaagtagatgtgatgaaactgaaagagcgagtaaaggagctggag
ggtccagttacagtgaaaccgcccaccgtcaccatcatgtctctggagtttgatccccag
accgctcacagaagactcctgatctcagctgatgaacggtcggtgcgtggtgttcagtac
accatcgcccgatatgatagcccaaggcgctatgacacagcgattgcagcccttacaaaa
acgggcttcaattctgggaggccatactgggaagtacaggtgaaagaccgttcatgcttc
gtggtgggcgtagcggctgaatcggcgccccggaaaggagagatcagatacaggcccagt
aatggctactggaccatacagaaggaaaacggacagcactatatgctagcagagcatccc
gtccggctccgcctttcagacaaactcaacatcattgggatcctcattgacttctccagt
ggggaggtggtcttctacaacgcccaaaccagagcagtgctctacacattcagcaggaac
aaatttacacagaagctgtacccgtacgtggccacctgtggcagtgagggtccagaggac
tggcccatagagctgctggataccgccttggtaccgtggctcaattaa
DBGET
integrated database retrieval system
