KEGG   Ictalurus punctatus (channel catfish): 108258752
Entry
108258752         CDS       T04658                                 
Name
(RefSeq) probable glutamate--tRNA ligase, mitochondrial isoform X1
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu00860  Porphyrin metabolism
ipu00970  Aminoacyl-tRNA biosynthesis
ipu01100  Metabolic pathways
ipu01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    108258752
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108258752
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ipu01007]
    108258752
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ipu03016]
    108258752
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ipu02048]
    108258752
Enzymes [BR:ipu01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     108258752
Amino acid related enzymes [BR:ipu01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   108258752
Transfer RNA biogenesis [BR:ipu03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    108258752
 Prokaryotic type
   Other AARSs
    108258752
Prokaryotic defense system [BR:ipu02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    108258752
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-GeneID: 108258752
NCBI-ProteinID: XP_017313119
Ensembl: ENSIPUG00000013399
UniProt: A0A2D0Q494
LinkDB
Position
26:complement(20382973..20386843)
AA seq 579 aa
MIKVCVCVCVCVCVCKMVVYRFLGVGGPVLVTGLIPRFSARFYNNLTNNNNNNNNNKLKN
KNPVRSVSGLRDATHTLSTHTHSGSVCVAEREVRVRFAPSPTGFLHLGGLRTALYNFLFA
KQHGGTFILRLEDTDQSRIVHGAAQDIEHTLEWAGIPPDESASRGGVYGPYVQSERLSLY
SAAAASLIESGHAYYCFCTNHRLELLKKEALHRGQTPRYDNRCRHLHADQVQENLAQGKP
HAIRFGLHAEAEPFEDLVFGWTGHAVGEVEGDPVILKNDGFPTYHLANVVDDAHMHVSHV
LRGAEWLTSTCKHLQLYRALRTTPPTYAHLPLLLNPDGTKLSKRQGDIYISHFRQQGALP
EALLDLITNCGSGFNSNRIGRNLNELISEFNVSKIVTHSAVLDLRKLPEFNRVHLQQRIE
DGLQCRLLVDEVKNLLTLTYNDLIQERDVLDHNYILRVLHMRKRHISSVKDLVSPVYSYL
WLRPSVSWQQLEEMSSESHDIIAHVMLVIKGRNGEYTPEFLTAELKLIAKTLKKTKYSSV
MKILRLALTGQQQGPSVGEIMVSLGEDEVCCRLQRILEA
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgattaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaaatggtggtgtat
cggttcctcggtgtcggcggtccggtgctcgttaccggtttgatccccagattcagtgcg
cggttttataataatctgactaataataataataataataataataataagttaaaaaat
aagaacccggtccggagtgtgtcggggctcagagacgctacacacactctcagtacacac
acacacagcggaagtgtgtgtgtcgcggagagagaagtgcgggtccgattcgcccccagt
cccaccgggtttctacacctgggcggtttgcgtacagcgctctataacttcctgtttgcg
aagcagcatggcgggacgtttatcctgcgtctggaggacacggaccaatcacgcatcgta
cacggagcagcacaggacatcgaacacacactcgagtgggcgggtatcccccctgacgag
agtgcatctagaggaggagtgtatggtccatatgtccagtctgagcgtttgagtttgtat
tctgctgctgcagcatctctgatagaatcaggccacgcctactactgcttctgcaccaat
cacagattagagctgctcaagaaggaagcgctgcatagaggacagacaccacggtatgat
aacaggtgcaggcacctacatgctgatcaggtgcaggagaacctggctcagggcaaaccc
cacgccattcgttttggtctccatgcagaggcggagccgtttgaggatctggtgtttggt
tggacagggcacgcagtgggggaggtcgagggcgaccctgtgatcctgaagaacgacggc
ttccccacctatcacctggccaacgtggtcgatgacgcacacatgcacgtgagccatgtt
ctgcgtggtgctgagtggctcacctccacctgtaaacacctgcaactgtaccgtgccctg
cgcacgactccgcccacctatgctcatctgccgctactactgaacccagatggaacaaaa
ctgtccaaacggcagggggacatctacatctcacacttcagacagcagggagcgctgccc
gaggcactgctcgacctcatcactaactgtggctctgggttcaacagtaatcgtattggc
cgaaatctgaatgagctgatcagtgaatttaacgtctcaaaaatcgtgacacactcggct
gtgctcgatctcagaaaactcccagaattcaacagggttcacctgcagcagcgtattgag
gatgggcttcagtgccgcctcctggtggacgaagtgaagaatctcctcacactcacttac
aatgatctgatacaggagcgggacgttctggatcacaattatatcctcagagtactgcac
atgaggaagcgtcacatctcatcagtgaaagacctggtctcccccgtttactcgtatctg
tggctccgcccctctgtatcctggcaacagctggaggagatgagctctgaatcacatgac
atcattgctcacgttatgctggtaattaaaggacgtaatggtgaatacacacccgagttc
ctcacagctgaactgaagctcatcgccaaaacactaaagaaaaccaaatacagttcagtt
atgaagatactgagacttgcactgactggacaacagcagggccccagtgtgggtgagatc
atggtctctcttggtgaggacgaggtttgttgtcggctacagagaattttagaagcataa

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