Ictalurus punctatus (channel catfish): 108258754
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Entry
108258754 CDS
T04658
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108258754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108258754
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Others
GGA
108258754
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GGA_N-GAT
GAT
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
108258754
NCBI-ProteinID:
XP_017313125
Ensembl:
ENSIPUG00000013423
UniProt:
A0A2D0Q6Z5
LinkDB
All DBs
Position
26:complement(20361115..20382819)
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AA seq
570 aa
AA seq
DB search
MAEEEQSVDFLLVCLNKATDPENPSERWDCMQEFYQHVNTLPNGPQIATRLLAHKIQSPQ
EKEALQALTLLEVCMNNCGKRFHSEAAKFRFLNELIKVLSPKYLGVWSTEQVKQKVMEVL
YSWTRWLKDEPKVQEAYSMLKKQGIVKKDPKLPDTIALPPPSPRQEVSVFDNEDKSKMLS
RLLKSGRPEDLQMANTLIKSTLQEEQEKMEKESRRVSTLQEVETCTSQLKLLLNQQHTQH
TPEMQDLYERCDRLRSSLFRLASDTVDNDEALAEILRRNDELTHVMNLYREKTQKPQTET
DTTLVSPVKSYHLIDFSLLGDSAPCGQVEQSTTLLQDEEQQKIHGADSGRNTLGVKSYLD
ELLQLEDTVKVTRETGQMEMAYRNEDYNTHNASVLAAIEPELRSRSASRDNQPVGPGGLP
EPRPVSSLSDITVSLDSITPSHIKPITVFNHRGVHVSLHFTKEALPSHPDVAVIIVSVVN
TSPLPVSDFLFLAAVPKSMCVRLQAATGSTLPPYSPLLPPAALSQILLLSNPLRKPVRLR
FRVTLSLGQERLQQDGDIDQFPQWNSWIHL
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaagagcagagtgttgactttctgcttgtttgtctgaataaagcaacagat
cctgagaacccgtcagagagatgggactgcatgcaggagttctaccagcatgttaacaca
ctccccaacgggccccagattgcgacgcgactcctggcccataagatccagtctcctcag
gagaaagaagctcttcaggctctcactttgttggaggtgtgtatgaataattgtgggaaa
cgtttccacagtgaagcagcgaagttcagattcctgaatgaactcattaaagttctctct
ccaaagtatctgggtgtgtggagcacagaacaggtgaagcagaaggtgatggaggttttg
tacagctggactcggtggttaaaggatgagccgaaggtgcaggaagcgtacagcatgctg
aagaaacaaggaatagtgaaaaaagacccaaagcttcctgacaccatcgcacttcctcca
ccttctccacgacaggaagtgtctgtgtttgataatgaagataaatcaaagatgttgtct
cggttattgaagagcggccgtccagaagacctccagatggctaacactctgataaagagc
acactacaagaggagcaggagaagatggaaaaagagagcaggcgtgttagtacccttcag
gaagtggagacgtgcacatcgcaacttaaactactcctgaaccaacaacatacacaacac
actccagagatgcaggatctgtatgagcgctgtgataggctgaggtcaagccttttccga
ttggccagtgacactgtcgacaacgatgaggctttagctgagatcctacgcaggaatgat
gaactcacacatgttatgaatctgtacagagagaaaacacagaaaccacaaacagagacg
gacacgacactggtgagtcctgtgaagtcctatcacctgattgatttctcgctgctggga
gatagcgccccctgtggccaagtggagcagagcacaactctactgcaggatgaagagcag
cagaaaatacacggggcagattcaggcagaaacaccctcggtgtgaaatcctacctcgat
gaactgttacagttggaggacacggtgaaggttacgagagagacaggacaaatggagatg
gcgtacagaaatgaagactacaatacccataatgcatcagtattagcagcaattgaacca
gagcttcggtccagatcagcttccagagacaatcagccagtcggtccaggtggtcttcct
gaaccccgccctgtttcatccctctctgacatcactgtctctctggactctattacgccc
agtcacattaagccgataacagtgtttaatcatcgtggtgtacatgtctctctgcacttc
actaaagaagctcttccatctcaccctgatgttgctgtcatcatcgtgtctgtggttaac
acttcgccacttcctgtttctgacttcctcttcctggctgctgttcccaaaagcatgtgt
gtgaggctgcaggcagctacaggaagcacattaccgccgtacagccctctgctgccccct
gctgccctctctcagatacttctgctctccaacccactcaggaagccggtgcgtctgcgt
ttcagagtgactctgagtctcggacaggagcgtctgcagcaggatggagacatcgaccag
ttccctcagtggaattcttggattcacctttga
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