Ictalurus punctatus (channel catfish): 108258852
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Entry
108258852 CDS
T04658
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
KO
K04520
amyloid beta A4 protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108258852 (appa)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108258852 (appa)
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108258852 (appa)
Peptidases and inhibitors [BR:
ipu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
108258852 (appa)
Proteoglycans [BR:
ipu00535
]
Cell surface proteoglycans
Others
108258852 (appa)
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Others
108258852 (appa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
108258852
NCBI-ProteinID:
XP_017313286
Ensembl:
ENSIPUG00000009697
UniProt:
W5U9W6
LinkDB
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Position
26:7421164..7456959
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AA seq
754 aa
AA seq
DB search
MWDRRLFLLLMVASSALAVEMPSEEGPGLLAEPQVAMFCEKLNMHMNIQSGKWEPDPSGT
KSCVNTKEGILQYCQEVYPDLQITNVVEANQPVSIQNWCKKGRKQCRSHVHVVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCSDHTMNLHDYGMLLPCAIDRF
RGVEFVCCPVETELEKDDAEAEEDDSDVWWGGAETDYSDNSMTREAEPAEQIEAEPVEGE
DDDLIEEEEEALDNDQDGDGEEEEEEDDDDDEMIDERNDNEQTTNVAMTTTTTTTTESVE
EVVREVCWANAETGPCRAMLPRWYFVKEEGRCAPFIYGGCGGNRNNFESEEYCLSVCGGV
LPTTSPSSPDAVDRYLETPADENEHAHFQKAKESLEAKHRERMSQVMREWEEAERQSKSL
PRADKKAVVQHFQEKVEALEMEAASERQQLVETHMARVEALLNDRRRLALESFLSALQAD
QPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRVVDPKKAAQIRPQVLTHLRVIEERMNQ
SLALLYKVPGVLEDIQDQVELLQHEQQEMSAQLASLQSDVRVSYGNDALMPDSTAPLDLL
PSEDSEHLGFIHPERFNQPNTQNHVEPVDVRPFPDRGLPTYPVSGLKPEDVPELRMEAEE
RHNAAYEVHHQKLVFFAEDVSSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGV
IEVDAAITPEERHLSKMQQNGYENPTYKFFEQIN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatcgtcggcttttcctgttattgatggtcgcgagctcggctctcgcggtggag
atgccatcagaagaaggaccaggcttactggccgagccacaagtagccatgttttgcgag
aagctcaatatgcacatgaacatccagagtggcaagtgggagccggatccttcaggcaca
aagagctgcgtgaacaccaaagaaggcatccttcaatattgccaagaggtctacccagat
ctgcagatcacgaacgtggtggaagccaatcagccggtcagcatccagaactggtgcaag
aagggtcggaagcagtgtcgcagtcatgtgcacgtcgtagtgccttaccgctgcctcgtg
ggtgaatttgtgagtgacgccttgttggttcctgataagtgcaagttcctgcaccaggag
cggatggacatgtgtgagagtcacctgcactggcacactgtggccaaagagtcctgcagc
gatcataccatgaacctgcacgattatgggatgttgttgccatgtgccatcgaccgtttc
cgtggcgtggagtttgtgtgctgcccagtggagactgagctggagaaggatgacgcagag
gcagaggaggacgattcagacgtctggtggggaggagctgagacagactattctgataac
agcatgactcgggaggcggagccagcagagcagatcgaggcggagcctgtagagggtgag
gatgatgacctcattgaagaagaagaggaggctctagataatgaccaggatggtgatgga
gaagaggaagaggaggaggacgacgacgatgacgagatgattgacgaacgcaatgacaac
gagcaaaccactaacgtcgccatgactaccactacaaccaccacgaccgagtccgtcgaa
gaagtggtccgagaagtgtgttgggcgaacgcagagactggtccgtgcagggccatgttg
ccccgctggtattttgtgaaggaagaaggtcgatgcgctcccttcatctatgggggctgc
ggaggcaaccgtaataactttgagtcggaggaatactgcctatctgtctgcggtggtgtg
ttgcccaccacgtctccaagctcgccagacgcagtggaccgctacctggagacaccagcc
gacgagaatgagcacgcacactttcagaaggccaaggagagcctggaagccaaacatcgt
gagagaatgtctcaggtgatgagagagtgggaggaggctgagcgtcagtctaagagtctg
ccacgtgctgataagaaggcagtcgtccagcacttccaggagaaggtggaggctttggag
atggaagcagctagtgagaggcaacagctagtggaaactcatatggctcgtgtggaggcc
cttctcaatgaccgtcgacgccttgcacttgagagttttctgagtgccctgcaggcagac
cagccacggccacgtcatgtgttcagtctattgaagaagtacgtgcgtgccgagcagaag
gacaggcagcacaccctgaaacactttgagcatgtgcgcgttgtggaccccaagaaggcc
gctcagattcgccctcaggtgttgacccacttgcgtgtgattgaggagaggatgaaccag
tctctggcacttctgtacaaagttccaggcgtgttggaggacatccaggaccaagttgaa
cttttacagcatgagcagcaggagatgtcagcacagttagcatcgctgcagagcgacgtg
agagtgagctacggcaatgatgcactgatgccagacagcaccgccccgctcgacctactg
ccgtctgaagactcggagcacctgggcttcatccaccctgaacgctttaaccagcccaac
actcaaaaccatgtggagcctgtagatgttcgtcccttccctgacagggggcttcctact
tacccagtatctggtctgaagcctgaggatgttcctgagctgaggatggaggcagaggag
aggcacaatgctgcttatgaagtgcaccaccagaaactggttttcttcgccgaggacgtc
agctctaacaagggtgctattattggcctgatggtaggaggtgttgtcatagcaaccgtc
attgtcatcaccctggtaatgctgcgaaagaagcaatacacttccatccaccacggtgtg
atcgaggtggatgccgccatcactccagaagagcgccatctttctaagatgcagcagaat
ggctacgagaatccaacctataagttctttgagcagataaactaa
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