Ictalurus punctatus (channel catfish): 108258912
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Entry
108258912 CDS
T04658
Name
(RefSeq) fibrinogen alpha chain
KO
K03903
fibrinogen alpha chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04517
IgSF CAM signaling
ipu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108258912
04518 Integrin signaling
108258912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108258912
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108258912
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108258912
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108258912
Hyaluronan
Extracellular matrix or blood plasma proteins
108258912
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
108258912
NCBI-ProteinID:
XP_017313407
Ensembl:
ENSIPUG00000024028
UniProt:
A0A2D0Q534
LinkDB
All DBs
Position
26:71523..74899
Genome browser
AA seq
708 aa
AA seq
DB search
MKLQYSLLCLCALLISASCAEEPTVLGPRGPRPNEPGFKADKCATEKEWPVCLDDEWGRK
CPSGCRIQGLLDQTDHEILNKIEKIRKLLDEGKKLHRSTDLESKNTYNFLRERLVSSAGN
DNRYTTLAEQLRQRIVELKIKIDRQLRVLEALKAQIKTQFISVQRLEVDIDIKLRSCKGS
CASSVNFSVDKEGYESLEKQLDRLDTLKVQTVETVSSLKVLKSRPLKDVNVPSIYKSITS
DTERAAQRKTYFSDVGQLQLSLEAEGSTAETAATVSKVSTGTGQSTPISTTRITSQSLSC
TQTVRKVTTVTKDGVQEKYETVRSGPGCDTIGKLGLSEAELLSAAKDGKELTADGFTVKV
TGGDSKSITTLNRGDGELGGLGGDFFKGLGSSGQDRKLSSSFTSSSSSSSSSSKTIISGG
SKGFHSDTKSITSTSSPDYGDDLGGFLRGDIEDDLPDLHARSLKSRDDRKADFIGGDCVE
IQQKHTAGDQSGLFKVKPAGSEEVVELYCDQATGLGGWVLIQQREDGSVNFNRTWDEYRV
GFGKIDKQGRGEIWIGNHILHLLTQKESVLRVELLDWAGNEAYAEYNVQVGSETEGFQLN
VSSYTGDAGDALVQGLANTGSFLSHAGMKFSTFDRDNDKWEESCAKIYGGGWWYNNCQSA
NLNGIYYKGGKYDRASKIPYEVENGVVWLPYKPADYSLKVVRMKIRPL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcagtactctctcctctgcctgtgtgcgctcttaatttctgcctcgtgtgcg
gaagagcctacagttctgggccctagaggccctcgtcctaatgaacctggcttcaaggct
gacaaatgtgccacagagaaagaatggcccgtctgcttagatgacgaatggggtagaaaa
tgtccatctggctgccgaattcaaggccttctggatcaaaccgaccacgagatcctcaac
aagattgagaagatccgcaagcttcttgacgagggaaagaaattgcatcgatccacagat
ttggagtccaaaaatacgtacaactttctgagagagaggctcgtctccagcgcaggtaat
gataacagatataccactttggctgaacagctgaggcagaggattgttgagttgaagatt
aaaatcgaccgtcagctgagagtgctggaggctttaaaagctcaaattaaaacccagttc
atctctgtacagcgcctggaggttgacattgacatcaagctgcgcagctgtaaaggttcc
tgtgccagctctgtgaacttctctgtggacaaggagggctacgaatctctggaaaagcag
ctggaccgccttgacaccttaaaggtccagactgttgaaactgtcagttccttaaaggta
ctgaagagcaggccactgaaagacgtaaacgtgccgtccatctacaagtctataacctct
gacacggaaagagccgcgcagaggaagacctacttctctgatgtgggccagcttcagctc
tccctggaggctgagggatccacggcagaaacggccgccaccgtcagcaaagtcagcaca
ggtacgggccaatctacacccatctctaccacacgaatcaccagccaatcactcagctgc
acccagaccgtccgcaaggtaacaacggtcacaaaagatggagttcaggaaaagtacgaa
acggtgagaagtgggccagggtgtgacaccattggaaaacttggcctttctgaggcagaa
ctcctgagcgcagctaaagatggaaaagaactgactgctgatggcttcacggtcaaagta
actggtggagattcaaaatccatcaccacactcaaccgtggtgatggagaactcggtggg
ctcggtggagatttctttaagggtctgggttctagcggacaggatcgtaagctctcctca
tccttcacttcttcctcatcctcttcctcctcctcctccaaaaccatcatttccggcggg
agcaaaggttttcactcagacactaagagcatcacgtcaacttcttcacctgattacggt
gatgacctcgggggattcttacgcggcgacatagaagatgatcttcctgacctacatgct
cgtagtttgaagtcacgtgacgatcgcaaagctgattttattggcggagattgtgttgag
atccagcagaagcacaccgcgggtgatcagagcggcctgttcaaagtaaagccggccggg
tcggaggaggtagtggagctttactgtgaccaggccacaggtttggggggctgggttctg
atccagcagagggaggacggctctgttaacttcaaccgcacttgggatgagtatcgggtt
gggtttgggaagatagacaagcaaggaaggggtgagatttggattgggaaccacatatta
catctcctcactcagaaggaaagtgttctgagagtggagctgttagactgggcaggaaac
gaggcgtatgcagaatataacgtccaggtgggctcagagacagaggggttccagctaaat
gtatcatcttacacaggagatgcaggagatgctctggtgcaggggctagctaacacgggt
tccttcctttcacacgctgggatgaagtttagcacgtttgacagggacaatgacaagtgg
gaggagagctgtgctaagatctatggaggcggatggtggtacaataactgccagtctgcc
aacctcaatgggatttactacaagggcgggaagtacgatcgtgctagcaaaattccctat
gaggtagagaatggagtcgtgtggctgccgtataaaccagcagattattcccttaaagtg
gtcagaatgaagatcaggcctctctga
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