Ictalurus punctatus (channel catfish): 108258912
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Entry
108258912 CDS
T04658
Name
(RefSeq) fibrinogen alpha chain
KO
K03903
fibrinogen alpha chain
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108258912
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108258912
00536 Glycosaminoglycan binding proteins [BR:
ipu00536
]
108258912
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108258912
Glycosaminoglycan binding proteins [BR:
ipu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108258912
Hyaluronan
Extracellular matrix or blood plasma proteins
108258912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
MAP65_ASE1
Motif
Other DBs
NCBI-GeneID:
108258912
NCBI-ProteinID:
XP_017313407
Ensembl:
ENSIPUG00000024028
UniProt:
A0A2D0Q534
LinkDB
All DBs
Position
26:71523..74899
Genome browser
AA seq
708 aa
AA seq
DB search
MKLQYSLLCLCALLISASCAEEPTVLGPRGPRPNEPGFKADKCATEKEWPVCLDDEWGRK
CPSGCRIQGLLDQTDHEILNKIEKIRKLLDEGKKLHRSTDLESKNTYNFLRERLVSSAGN
DNRYTTLAEQLRQRIVELKIKIDRQLRVLEALKAQIKTQFISVQRLEVDIDIKLRSCKGS
CASSVNFSVDKEGYESLEKQLDRLDTLKVQTVETVSSLKVLKSRPLKDVNVPSIYKSITS
DTERAAQRKTYFSDVGQLQLSLEAEGSTAETAATVSKVSTGTGQSTPISTTRITSQSLSC
TQTVRKVTTVTKDGVQEKYETVRSGPGCDTIGKLGLSEAELLSAAKDGKELTADGFTVKV
TGGDSKSITTLNRGDGELGGLGGDFFKGLGSSGQDRKLSSSFTSSSSSSSSSSKTIISGG
SKGFHSDTKSITSTSSPDYGDDLGGFLRGDIEDDLPDLHARSLKSRDDRKADFIGGDCVE
IQQKHTAGDQSGLFKVKPAGSEEVVELYCDQATGLGGWVLIQQREDGSVNFNRTWDEYRV
GFGKIDKQGRGEIWIGNHILHLLTQKESVLRVELLDWAGNEAYAEYNVQVGSETEGFQLN
VSSYTGDAGDALVQGLANTGSFLSHAGMKFSTFDRDNDKWEESCAKIYGGGWWYNNCQSA
NLNGIYYKGGKYDRASKIPYEVENGVVWLPYKPADYSLKVVRMKIRPL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcagtactctctcctctgcctgtgtgcgctcttaatttctgcctcgtgtgcg
gaagagcctacagttctgggccctagaggccctcgtcctaatgaacctggcttcaaggct
gacaaatgtgccacagagaaagaatggcccgtctgcttagatgacgaatggggtagaaaa
tgtccatctggctgccgaattcaaggccttctggatcaaaccgaccacgagatcctcaac
aagattgagaagatccgcaagcttcttgacgagggaaagaaattgcatcgatccacagat
ttggagtccaaaaatacgtacaactttctgagagagaggctcgtctccagcgcaggtaat
gataacagatataccactttggctgaacagctgaggcagaggattgttgagttgaagatt
aaaatcgaccgtcagctgagagtgctggaggctttaaaagctcaaattaaaacccagttc
atctctgtacagcgcctggaggttgacattgacatcaagctgcgcagctgtaaaggttcc
tgtgccagctctgtgaacttctctgtggacaaggagggctacgaatctctggaaaagcag
ctggaccgccttgacaccttaaaggtccagactgttgaaactgtcagttccttaaaggta
ctgaagagcaggccactgaaagacgtaaacgtgccgtccatctacaagtctataacctct
gacacggaaagagccgcgcagaggaagacctacttctctgatgtgggccagcttcagctc
tccctggaggctgagggatccacggcagaaacggccgccaccgtcagcaaagtcagcaca
ggtacgggccaatctacacccatctctaccacacgaatcaccagccaatcactcagctgc
acccagaccgtccgcaaggtaacaacggtcacaaaagatggagttcaggaaaagtacgaa
acggtgagaagtgggccagggtgtgacaccattggaaaacttggcctttctgaggcagaa
ctcctgagcgcagctaaagatggaaaagaactgactgctgatggcttcacggtcaaagta
actggtggagattcaaaatccatcaccacactcaaccgtggtgatggagaactcggtggg
ctcggtggagatttctttaagggtctgggttctagcggacaggatcgtaagctctcctca
tccttcacttcttcctcatcctcttcctcctcctcctccaaaaccatcatttccggcggg
agcaaaggttttcactcagacactaagagcatcacgtcaacttcttcacctgattacggt
gatgacctcgggggattcttacgcggcgacatagaagatgatcttcctgacctacatgct
cgtagtttgaagtcacgtgacgatcgcaaagctgattttattggcggagattgtgttgag
atccagcagaagcacaccgcgggtgatcagagcggcctgttcaaagtaaagccggccggg
tcggaggaggtagtggagctttactgtgaccaggccacaggtttggggggctgggttctg
atccagcagagggaggacggctctgttaacttcaaccgcacttgggatgagtatcgggtt
gggtttgggaagatagacaagcaaggaaggggtgagatttggattgggaaccacatatta
catctcctcactcagaaggaaagtgttctgagagtggagctgttagactgggcaggaaac
gaggcgtatgcagaatataacgtccaggtgggctcagagacagaggggttccagctaaat
gtatcatcttacacaggagatgcaggagatgctctggtgcaggggctagctaacacgggt
tccttcctttcacacgctgggatgaagtttagcacgtttgacagggacaatgacaagtgg
gaggagagctgtgctaagatctatggaggcggatggtggtacaataactgccagtctgcc
aacctcaatgggatttactacaagggcgggaagtacgatcgtgctagcaaaattccctat
gaggtagagaatggagtcgtgtggctgccgtataaaccagcagattattcccttaaagtg
gtcagaatgaagatcaggcctctctga
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