Ictalurus punctatus (channel catfish): 108258963
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Entry
108258963 CDS
T04658
Symbol
arhgef7b
Name
(RefSeq) rho guanine nucleotide exchange factor 7b isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
108258963 (arhgef7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108258963 (arhgef7b)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108258963 (arhgef7b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
SH3_9
CH
RhoGEF67_u1
PH
ZapB
PH_8
DH_Alsin
Syntaxin
CAMSAP_CH
TraG-D_C
bZIP_1
Phage_scaffold
GlutR_dimer
SH3_3
Seadorna_VP6
COG6_N
Motif
Other DBs
NCBI-GeneID:
108258963
NCBI-ProteinID:
XP_017313521
Ensembl:
ENSIPUG00000020874
UniProt:
A0A2D0Q727
LinkDB
All DBs
Position
26:complement(13133874..13171474)
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AA seq
788 aa
AA seq
DB search
MNPAEQTVTWLIALGVLESPKKRVSDPESFLQSSLRDGVVLCRLLERLRPGSLLTVFQEP
KNDGECLGNIREFLKGCASYRVETFEAEDLFQGQNFTRVLSSLVALNQATADTGSDSDSI
CVQHSSLRIKSFDSLNCQPSRRRSSKRVHSQYCSLDMSENSSAQPLVKARFNFQQTNEDE
LCFNKGDIIQVTRQEDGGWWEGTINGKTGWFPSNYVKEIKGSDKPISPKPGTLKSPPKVF
ETSAATKTYYNLVIQNIVQTETEYGKELQTLLSTYLRLLQPTDRLTTSDIAHILGNLEEI
SSFQQTLVQSLEECTKFPESQQRIGSFFLSLMPQMKSLYVAYCSNHPSAVDVLTQHSEEL
GEFMESKGASSPGILTLTTNLSKPFMRLDKYPTLLKELERHMEDFHPDRPDIQKSLTAFK
NLSAQCQEVRKRKELELQILTEPVRGWEGEGIKTLGTVIYMSQVLMQYHGSEEKNERYLL
LFPHVLLVLSASPRMSCFIYQGKLPLTGMVVNKSEETRNTFELSGSMIDRIQVICNNPQD
LQEWVEHLHRQTRRTSSSISSLKPCHTLPAHPPTPSRHSESRGAYHTLPHPSSHCTPHST
MMWGPLEPPKTQKPWSLSCLRPAPPLKASAALCYKEDLSKSPKSVKKLLHKRKERKPSDE
EFSMRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKDSGLHMLFPEEEKIIVEEIK
SNGQTVIEERSLVDTVYALRDEVQELKQDNKRMKSSLEEEQKARKELEKIVRRVLKNMND
PSFDETNL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaatccggccgagcagacggttacgtggctcatcgcgctcggtgtgctggagtcgccg
aaaaagcgtgtgtcggatcccgagagctttctgcagagctcgctgagagacggcgtggtg
ctgtgcaggctgctcgagcgactgcgtccgggctcgctcctcacggttttccaggaaccg
aagaacgacggcgagtgcttgggcaacatcagggagttcctcaaaggctgtgcttcatac
cgagtggagacattcgaagctgaggacctgtttcagggccagaacttcaccagggtgctg
agttccttggttgctctcaaccaagcaacagcagatactggatccgacagtgactccata
tgtgttcaacactcctctctgcgaatcaagtcctttgactccctgaactgtcagccttcc
cgcaggagatcatccaaacgagtgcacagccagtattgcagtctggacatgtctgagaac
agttcagctcagcctttggtgaaggcgcggtttaatttccagcagacgaatgaggacgaa
ttgtgctttaacaagggtgacatcatccaggtgactcggcaggaggacggaggctggtgg
gaaggcacgattaatggcaagaccggctggttccctagcaactacgtcaaagagatcaaa
ggaagtgacaagcccatctcccccaagcctggaacgctgaagagtcctcccaaagtgttc
gagaccagcgctgctactaaaacctactataacctggtgatccagaatattgtgcagaca
gaaacggaatacggcaaagaactgcaaacactgctttcgacatacttgagactactgcag
cccacagacagactgaccacgtccgatatcgcccacattctgggtaatctagaagagatc
agctccttccagcagacactggtacagtcactagaggaatgcaccaaatttccagagagc
cagcagaggatcgggagcttcttcctgtccctcatgccccaaatgaagagcctttatgta
gcttactgctccaaccacccttctgctgtcgatgtcctcacgcaacacagtgaggagctg
ggtgagtttatggagagtaaaggtgcaagcagtcctgggattctcaccctcaccaccaac
ttgagtaaacccttcatgagactggataaataccccacactgctcaaagagctcgagaga
cacatggaggattttcacccggaccgcccagacattcagaaaagcttgactgctttcaag
aatctttctgctcagtgtcaggaggtgaggaagcggaaggagctggagctgcagattctg
actgagccggtgcgtggttgggaaggggagggcattaagaccctgggcaccgtcatctac
atgtctcaggtcctcatgcagtaccatggcagcgaagagaagaacgaacgctacctcctg
ctcttcccccatgtgctgctggtgctttctgcgagccctcggatgagctgctttatctac
caggggaaacttcctctaacagggatggttgttaacaagagtgaggaaacaaggaacact
tttgaactatccgggagtatgattgacaggatccaggtgatctgcaataaccctcaggat
ttacaggagtgggtggagcatcttcaccgccagaccagacgcacgtcaagcagcatttcc
agtttgaaaccatgccatacgctccccgctcacccacccaccccttcgagacactcggag
agccggggagcctaccacaccctccctcacccctcgtcccactgcaccccccacagcacc
atgatgtggggacccttggagccaccaaaaacccagaaaccatggagcctgagctgtctg
cgaccagcaccacctttaaaagcatcagcagctctctgttataaagaggatctcagcaaa
agtcccaagagcgtgaagaagcttctgcacaaacgcaaagagaggaagccatcagatgag
gagttttctatgaggaaaagcactgcagccctggaggaggatgcgcagatcctaaaagta
atagaggcgtattgcacaagtgccaagacaagacaaacactcaattcaagttcaaggaag
gattcagggctgcatatgcttttccctgaagaggagaagatcattgtagaagaaataaag
agcaatggtcagacagtgattgaagagaggagtttggtggacactgtttatgcactgagg
gatgaagttcaggaactcaagcaggataacaagaggatgaagagcagtttggaggaggag
cagaaagcaagaaaagagctggagaagatcgtcaggagagtattaaagaacatgaacgat
ccttcatttgatgaaacaaacctgtaa
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