Ictalurus punctatus (channel catfish): 108258965
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Entry
108258965 CDS
T04658
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X1
KO
K03243
translation initiation factor 5B
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ipu03012
]
108258965
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
eIF-5
108258965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
AAA_22
Motif
Other DBs
NCBI-GeneID:
108258965
NCBI-ProteinID:
XP_017313524
Ensembl:
ENSIPUG00000020910
UniProt:
A0A2D0Q5E3
LinkDB
All DBs
Position
26:complement(13178030..13205689)
Genome browser
AA seq
1202 aa
AA seq
DB search
MGKKQKNKGDDGAKDDGVDIDALAAEIEGAGAAKEQSKGMGKKKKGGKKDDYDEDDILKE
LEELSLETQGGKAKEPAKKSNSIEDTESEPAPTKAEKKKTKKGKREDDEREEAPGKDDME
NESRPKGKKAPTAPPAASAASESDNDSQPPCKTKVVKKGGRKGMSDSEDDHENGGAKKAG
GGDKEQSDDDSQAARKQKKKTKVKAKADSDNDDAEDDGSFKMKTAAQKKAEKKERERKKK
EEERAKMKAKKEEESAKKDAAKDAGSAAAPLPTETKKTEVEEVGGAEDQGEDDAEGEKKK
KDKKKKKGEKEEKEKKKGPSKAAVKAMQEALARMKEEEERAMREEEERERRLAELEAQRL
EQERLEAERKEKKKQKDKERKERLKKEGKLLTKSQKEARARAEATLRALQAQGVEVPSKD
SMPKKKPVYSDKRKKKPTTHTPEETSEVASPTSEVAEPIATVMVANASTEEPEAETKAES
ADLDDWEAMASDEERELKKVHIEVKETAATQPTRKAPAPAEQENGSEEEDDEDGDDEEED
DEDESEEEEEDEEKDSQTTKEKNGKEESSESSSESDSDDERTKEERMYDKAKKRIEKRRQ
ENLKNINLDKLRAPVVCVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLETI
VEQTKMVKNFERDSIKIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTL
ESINLLKEKKCPFIVALNKIDRLYDWKKSPDTDVVATLKKQKKNTKDEFDERAKAVMLEF
AQQGLNAALFYENKDPRTFVSLVPTSAHSGDGMGNLIALLVELTQTMLARRLAHCDELRA
QVMEVKALPGMGTTIDVILINGRLREGETIIVPGVEGPIITQIRGLLLPPPLKELRVKNQ
YEKHKEVNTSQGVKILGKDLEKALAGLPLLVAHKEDEIPVLKDDLIRELKQTLNAIKLEE
KGVYVQASTLGSLEALLEFLRTSKVPYAGINIGPVHRKDVMKASTMLEHDPQYAVILAFD
VKIERDSQEMADSLGVRIFSAEIIYHLFDAFTKYREDYKKQKQEEFKHIAVFPCKLRILP
QFIFNSRDPIVIGVTVEAGVLKTGTPLCVPSKAFVEIGIVTSIEVNHKPVDTAKKGQEIC
IKIEPIPGESPKMYGRHFEAVDIIVSKITRQSIDALKNWFRDEMQKSDWQLIMELKKTFE
II
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacagaaaaataaaggagatgacggtgccaaagacgacggagttgacatt
gatgccttagcagctgagatcgagggagctggagcagcaaaagaacagagcaaaggcatg
ggcaagaagaagaaaggagggaagaaagatgactatgatgaggatgacatcctgaaagaa
ctagaggagttatcacttgaaacccagggtggaaaagcaaaagaaccagcaaagaaatcc
aactccatagaggacacagagtccgagccagccccaaccaaggcggaaaagaagaagacc
aagaagggcaagcgtgaagacgatgagcgtgaagaagctccgggtaaagacgacatggag
aacgagagcaggccgaaaggcaaaaaggcacctacggctccccctgctgcttctgctgct
tcagagtctgacaacgattcgcaacccccatgcaaaaccaaggtggtcaagaagggcggg
aggaagggcatgtccgactctgaggatgatcatgagaacggaggcgcaaagaaggctgga
ggaggcgacaaagagcagtcagacgacgactctcaggccgcacgcaaacagaagaagaaa
acaaaagtgaaagcgaaggctgacagtgacaacgacgacgcagaagacgatggctccttt
aagatgaagacggcggcacagaagaaggcggagaagaaggagcgagagagaaagaagaag
gaggaagagagggccaagatgaaagcgaagaaggaggaagagtccgctaagaaggatgca
gctaaggatgcaggcagtgctgcggcccctctacccacggaaacaaaaaagactgaggtg
gaggaggtgggcggggccgaagaccagggcgaagatgacgccgagggtgagaagaagaag
aaggacaagaagaagaagaagggagagaaggaagaaaaggagaagaagaaagggccgagc
aaagccgcagtgaaggccatgcaggaggccctggctcggatgaaggaggaggaggagcga
gccatgagggaggaagaggaacgggagcgacgcctggccgagctggaggcgcagaggctc
gagcaggagcgactggaagcagagaggaaggagaagaagaagcagaaggacaaggaaagg
aaggagaggctgaagaaggagggcaagctcctgaccaagtcacagaaagaggctcgagcc
cgagctgaggccacgctccgtgcactgcaggcccagggtgttgaagtgccatccaaagac
tccatgccaaagaagaagcctgtttactctgacaaaagaaaaaagaagccaacaacacac
actcctgaagagacctcagaagttgcttcacccacgtcggaggtggcggagcctatcgcc
acggtgatggtagcgaatgcgtccacggaggagccagaagctgaaactaaggctgaaagc
gcagacctagatgactgggaggccatggccagtgatgaagaaagagagttgaagaaggtt
cacatcgaagtgaaggagaccgcagccactcagccaacccgcaaggctcctgctcctgcc
gaacaggagaacggtagcgaagaagaggacgacgaagacggggacgacgaagaggaggac
gatgaggacgagagcgaggaagaggaagaagacgaagagaaggacagccagacaaccaaa
gagaagaatgggaaagaggagagctcggagtcgagcagcgagagcgattcggatgacgag
cgcaccaaagaggagaggatgtacgacaaggccaagaaacgcatagagaaacggagacag
gagaacctgaagaacatcaacttggacaaactgagagctcctgtggtctgtgtgttgggg
catgtagatacagggaagaccaaaatccttgacaagctacgacacacgcacgtacaggat
ggagaggcaggtggaatcacccagcagatcggtgccaccaacgttcccttggaaaccatc
gttgagcaaaccaagatggtgaaaaattttgagagggatagtataaaaattccaggaatg
ctgattatcgacacaccgggacacgagtctttcagtaatctgagaaacagaggcagttcc
ctgtgtgacatcgcgatcctcgtggtggacataatgcacggactggaaccgcaaaccctc
gagtccatcaacctgctgaaggaaaagaagtgcccctttattgtggctcttaacaagatc
gaccgtctctacgactggaagaagagtccggacacggacgtggtggctacactgaagaag
cagaagaagaacactaaggatgagttcgatgagcgagccaaggctgtcatgctagagttc
gcccaacagggtttgaacgcagctctgttctatgagaataaggacccacgcacttttgtg
tctctggtgcccacctctgcgcattcaggcgacggcatgggcaacttgatcgccctgctg
gtagagctcacccagaccatgctggcacgcaggctggcccactgcgacgagctcagagca
caggtcatggaggtaaaagctctgcctggtatgggcacgacgatagacgtgatcctgatc
aacgggcgcttgcgcgagggcgagaccatcatcgtgccgggcgtggaggggcctatcatt
actcagatcagaggactgctgttgcctcctcctctcaaagagctccgtgtcaagaatcag
tatgagaagcacaaggaggtgaatacgtctcagggagtgaagatcctggggaaggatctg
gagaaggctctggcaggcctgccgctgctcgtggctcataaagaggacgagattcctgta
ctgaaggatgacctgatcagggagctgaagcagacactgaacgcgataaagctggaggag
aagggtgtgtatgtacaggcatcgacattgggctcactagaagcgctgctggaatttttg
cgcacatccaaagtgccttacgctggcattaatatcggtcctgttcaccggaaagacgtc
atgaaggcatctacaatgctggagcacgacccacagtacgcagtgatactggcgtttgac
gtgaagatcgaaagagactctcaggagatggccgacagtctgggcgtgaggatctttagc
gccgagatcatttaccatctgttcgacgctttcaccaaatacagggaagactacaagaaa
cagaagcaggaggagttcaagcacatagcagtgttcccctgtaagctgcgcatcctgcct
cagttcatctttaactccagagaccctatagtcataggggtgactgtggaggcaggagta
ctgaagacaggcaccccgctgtgtgtccctagcaaagcattcgtcgagattggcatcgtg
accagtattgaggtgaaccacaagccagtggacactgcgaagaaagggcaggagatctgc
ataaagatcgagccaattcccggcgagtcgcccaagatgtacggacgacatttcgaggct
gtggatatcatcgttagcaagattacccgtcagtccatcgacgcgctgaagaactggttt
agagacgagatgcagaagtcggactggcagctaatcatggagctgaagaaaacttttgaa
atcatctga
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integrated database retrieval system
