KEGG   Ictalurus punctatus (channel catfish): 108259017
Entry
108259017         CDS       T04658                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108259017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ipu03041]
    108259017
Spliceosome [BR:ipu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    108259017
 Complex B
    108259017
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_2
Other DBs
NCBI-GeneID: 108259017
NCBI-ProteinID: XP_017313615
Ensembl: ENSIPUG00000013962
UniProt: A0A2D0Q8C5
LinkDB
Position
26:complement(10095880..10105774)
AA seq 228 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNSQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRERRSRSRDRGRRDRERRRSRDRERSGRF
NT seq 687 nt   +upstreamnt  +downstreamnt
atggcggagtacctagcgtccatttttggtacagagaaagacaaggtcaactgctccttc
tactttaagattggagcttgtcgacatggagaccgctgctccagactccataataaacca
actttcagccagaccatcttgatccaaaacatctaccgtaaccctcaaaacagtgctcag
acagccgacgcctctcgctgtgccgtgagcgatgtggaaatgcaggagcattatgatgag
tttttcgaggaagtcttcacggaaatggaggagaagtacggcgaggtggaggagatgaac
gtgtgtgataatctgggcgatcacctcgtcggcaatgtttatgtgaagttccggcgtgag
gaggatgccgagaaagctgtgatggacctgaacaaccgctggttcaacagccagcccatc
catgctgagctctccccggttactgacttcagagaagcctgctgcaggcagtatgaaatg
ggggagtgcactcgaggtggcttctgtaacttcatgcacctaaagccgatctctcgcgag
ctgaggagggaactgtatggacgccgtaggaaaaggcaccgctctcgctctcggtctcgt
gaacgtcgctctcgctcgcgggaccgcggccgtcgcgaccgggagaggaggagatcaagg
gatcgtgaacgctccggaaggttttga

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