Ictalurus punctatus (channel catfish): 108259044
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Entry
108259044 CDS
T04658
Name
(RefSeq) probable cysteine--tRNA ligase, mitochondrial
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108259044
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108259044
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108259044
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
108259044
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108259044
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108259044
Prokaryotic type
108259044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
DALR_2
ELYS-bb
Motif
Other DBs
NCBI-GeneID:
108259044
NCBI-ProteinID:
XP_017313668
Ensembl:
ENSIPUG00000013774
UniProt:
W5U770
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Position
26:complement(10008572..10020882)
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AA seq
567 aa
AA seq
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MRPCVSLVRSAVWSCRLKVSHGAFQTNPTVPKRTLCMEIRSKWTRPAGYDTGIKTFNSLT
KQNEPLVLAQEGRATWYSCGPTVYDHAHLGHACSYVRFDILQRILTRIFGINITHVMVIT
DIDDKIIQRSLEERISPLVLARMYEEEFKRDMLALKVLPPAVYMRVTENVPQIVAFIEGI
IRNGHAYTTSQGDVYFDTRSIGSRYGKFANMGNAAGESGSKDKRDPRDFALWKAWKPLEP
FWESPWGRGRPGWHIECSTIASSVFGSQLDIHSGGIDLAFPHHENEIAQCEAYHKCDQWG
NYFLHSGHLHLKGSTEKMSKSLKNYITIKEFLQSFTANEFRLFCLLSKYRSAIDYSDASM
NEARSTLSSISSFIHNAQAYMQGHLQCQDIYESFLWERLSFTQATVRTVLSDDFDTPKAM
DAIMSLIHHGNCQLQPVTKVVGSSRCPAVFGAMLSYIRDIMDILGVDLLDEKASSSAESS
ILHNVVEQLVRFRSEVRNFALSVEDEATQDLHTSKVPQRKTPQPDRLPLLKACDALRNDL
MPLGVEIKDRGPNSTWEIKQQQKEKEG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaggccttgcgtgagtctggtcagaagtgcagtctggagctgcagactcaaggttagt
catggagcatttcagacaaatccaacagtcccaaagcggacgctgtgcatggaaatcagg
agcaaatggaccagaccagcgggctatgatactggcataaagactttcaacagtctcacc
aaacagaatgagcctctggttttagcccaagagggaagagcaacctggtacagttgtgga
cccacagtttatgatcatgcccatcttggtcatgcatgctcctacgtcagatttgacatc
ctgcagagaattttaaccaggatatttggaataaacataactcatgtcatggtcatcact
gacattgatgataagatcatacagagaagccttgaggagaggatctcaccgcttgtgctt
gccagaatgtatgaagaggagtttaaaagagacatgctggccctgaaggttctcccgcca
gccgtgtatatgagagtcacagagaacgtacctcagattgtagctttcattgaaggcatc
atcagaaatggccatgcgtacaccacaagccaaggggatgtgtactttgacactcgatcc
atcggcagtcgttatggcaagtttgcgaacatgggaaatgctgctggggaatcagggagc
aaggataaaagggacccccgagactttgccctgtggaaagcctggaagccgcttgaacct
ttctgggagtctccatggggaagaggaagacctggctggcacatcgagtgctccactatt
gccagctctgtgtttgggagccagttggacatccactcaggagggatcgacctggccttt
cctcaccatgagaatgaaattgctcagtgtgaggcgtaccacaaatgtgaccagtggggg
aactacttcctgcactcagggcaccttcatttgaaaggcagcacagaaaagatgtccaag
tccttgaagaattatattacaataaaggaattcttacagtcctttactgccaatgagttt
aggctgttttgcctgttaagcaagtacagatcagcgatagattacagtgatgccagtatg
aacgaagctcgttctacgctgtcctccatctctagcttcatccataatgcccaggcgtac
atgcagggtcacctacaatgccaagacatatatgagagctttttatgggagaggttatca
ttcacacaggctaccgtgcgaactgtactttcagacgactttgacacaccaaaggcaatg
gatgccatcatgagcctcattcaccatggaaactgtcagcttcagcctgttaccaaggtt
gttgggagctctaggtgtcctgcagtgtttggagcaatgctctcttacatcagggatatc
atggatatccttggagttgatctgctggatgaaaaggcgtcatccagtgctgaatccagt
attttacataatgtagtggagcagctggtgcggttccgtagcgaggttcgaaactttgct
ctctctgtggaggatgaagcgactcaggaccttcacaccagcaaagtgcctcagagaaag
acaccacagccagacagattgcccttactgaaggcctgtgatgctcttcgcaatgatcta
atgcccttgggagttgaaattaaggacagaggtcccaactctacatgggaaatcaaacaa
cagcagaaggagaaagaaggctag
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