KEGG   Ictalurus punctatus (channel catfish): 108259057
Entry
108259057         CDS       T04658                                 
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03410  Base excision repair
ipu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108259057
   03450 Non-homologous end-joining
    108259057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ipu03400]
    108259057
Enzymes [BR:ipu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108259057
DNA repair and recombination proteins [BR:ipu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     108259057
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     108259057
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_lambd_f DNA_pol_B_thumb HHH_8 BRCT BRCT_2 HHH_5 HHH NTP_transf_2 LIG3_BRCT PTCB-BRCT HHH_3
Other DBs
NCBI-GeneID: 108259057
NCBI-ProteinID: XP_017313679
Ensembl: ENSIPUG00000022704
UniProt: A0A2D0Q5U3
LinkDB
Position
26:complement(15045532..15053983)
AA seq 565 aa
METHGIMKAFPKVKRHRPHEGKDAPPVKKHPGQPVTGNIFQGVCVHIVPAGIGNARCDIF
QQQIVQNGGQVEAAYGPSCTHVVVDESVDRERASRLLKMETFPPAVQLVKCTWLSACISE
KKLLSTKDYRLHPCNRPQDAPAEEPKQIAVSCIPVPEETQPPDHKSAQDDPADVCSTGAP
QVPETQEEPLEEDVVSQNDLEALISGVKHDPGASDDTRNVSEKTNVLGKWVCAQSSQTKS
KNHNNHITDKLEQLAKVYTHTGDKWRALSYSKAVNALKSHHKPISSYEEAYKIPGIGKSM
ANKIVEIMESGHLRKLDQFGEALPVLELFTNIWGVGAKTAQLWYQQGFRTLEDIRTKATL
THTLRIGLKHYDDFLERMPRSEAAAIEKTVREAAHSVNPELLVVACGSYRRGKPTCGDVD
VLITHPDGQSHKGVFSKVLQKLHQSGFLTDDLVSHEENGEQKKYMGVCVLPGPGQRHRRL
DVIVVPHDEFACAILYFTGSAHFNRSMRALAKTKAMSLSEHSLNAGVVRKRSVKVVPGLP
LSTPTERAVFEHLGIPYREPHERDW
NT seq 1698 nt   +upstreamnt  +downstreamnt
atggagactcatggtattatgaaagccttccccaaagtgaagagacaccggccacatgag
ggtaaagatgctcccccggtcaagaaacatccgggtcaacctgttactgggaacatattt
cagggtgtctgcgtccacatagtccctgctggcataggaaatgcccggtgtgacatattc
cagcagcagatcgtgcagaatggaggccaggtggaagctgcttacggacccagctgcacg
cacgtggtcgtggacgagtcggtggacagggaacgagcgtcaaggctgctgaagatggaa
acctttccccctgctgtgcagctggtaaagtgcacttggctcagtgcttgcatctctgag
aagaagcttctgagcacaaaagactacaggcttcatccatgcaaccgtcctcaggacgct
cccgctgaggagccaaagcagattgctgtcagttgcatccctgttcctgaggaaacgcag
ccaccggatcacaaatcagctcaagatgatccagctgacgtgtgctccacaggtgctcca
caggtgcccgagactcaggaagaacccctagaggaagacgttgtgtcacagaacgatttg
gaggctctgatcagcggggttaaacacgatcctggtgcttcagatgacacgcggaatgtg
tcagaaaagacaaacgtgttgggaaagtgggtgtgtgcccagtcgtctcagacaaagagc
aagaaccacaacaatcacatcactgacaagctggagcagctagccaaagtgtacacacat
acgggtgacaagtggagggcgctgagctactcaaaagcagttaatgccctcaagagccat
cacaagccgatctcttcatatgaggaagcctataagatcccaggcatcggcaagagcatg
gccaataagattgtggagatcatggagagtgggcacctgagaaagctggaccagttcggg
gaggctctgcccgtcctggagctgttcaccaacatctggggtgttggcgcgaagactgcc
cagctttggtaccaacaagggtttcgtacgctggaggatattcgcaccaaggccactttg
actcacacgctgagaattggcctgaaacactacgacgacttcctcgaacgtatgccaaga
agcgaggcagccgccatcgagaaaacggtgagagaggcagcacacagcgtgaacccagaa
ctgctggtggtggcgtgcggctcgtaccggcgcgggaagcccacatgtggagacgtggac
gtgctcatcactcatccagacggccaatcgcacaagggcgtctttagcaaagtgctccag
aaactccatcagagcggcttcttgactgacgatttggtgagccacgaggagaacggcgag
cagaagaagtacatgggcgtatgtgtcctgccaggcccaggtcagcgccatcggaggctc
gatgtcattgtggtgccacacgatgaattcgcatgcgccattctgtatttcaccggctca
gcccatttcaaccgctccatgcgcgcactcgccaagacaaaagccatgagtctgtcagaa
cactctctgaacgccggcgtggtgcgcaagcgtagcgtgaaggtggtaccaggtttgccg
ctgagcacacctactgagagggcggtctttgagcacctgggcatcccatacagagaacct
catgagagagactggtag

DBGET integrated database retrieval system