Ictalurus punctatus (channel catfish): 108259070
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Entry
108259070 CDS
T04658
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259070 (rims1b)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
108259070 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
108259070 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
Motif
Other DBs
NCBI-GeneID:
108259070
NCBI-ProteinID:
XP_053531972
Ensembl:
ENSIPUG00000022460
UniProt:
A0A9F7RAV1
LinkDB
All DBs
Position
26:complement(14794161..14859461)
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AA seq
1524 aa
AA seq
DB search
MAASVGPQGGPRASLPASMPDIPDLSHLTEEERKVILAVMARQKEEEEKEQAMLKTLHQQ
FESYKEQVRRIGAENKRQQSIHKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGRV
SLRSNNVMWVCNLCRKQQEILTKSGEWFSSGPRGRPLSVAGPEADRDGKLRSRSQVTAGA
NLATANDTQPATDRTKGAEIMPASRARSEPPREKKRPVSLHEQNGKVIGRGERRVVPGRQ
PGQAAEDRAPGERRDIRRLEKGHSQEYDHPGDTAHPDQRRRKEEEERERQRREEEYQNRY
CSDPNLARYPVKPQKEEQEMRMHAKVSKMRQERHHSDMAINEVGLAQDGCETPGSRLSRR
AVGNENRKALLENHRAYSVDRTVGGSAGGGPVPLQKQGHSVSHMSPGGSQDLRDGQDWGL
KGYLEPGSAALLHKTKREKAAESFRKDSSLSSDQSECLRPPPPRAYRPKRGLNKRQMSIS
SSEEEGGSTPEYTSCEDVEIESISEKGDWDCHPLDPTIWHHPVTWQPSKEGDHLIGRITL
SKRSAVPREAGSLLGLKVVGGKITETGRLGAFITKVKKGSLADVVGHLRAGDEVLQWNGK
ALPGATEKDVYNIILESQSAPQVEIVVSRPIGDTPRIPEKSHPPLESTGSSSIDESHKVD
HPSISVMSPTSPGMLRDLPQDLPGQLSVKLWYDKVGHQLIVNVLQAIDLPSRPDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKSSEPRWNQTFLYSHVHRRDFRERMLEITVWDQPRAQE
EESEFLGEILIELETALLDDQPHWYKLQTHDVSSLPLPQPSPYLPRRHVHNDSPSKKLQR
SHRIIETDYDDAITVVSSAAERNSRERERCSTLTVPERQAAIQHRSRSVSPHREDQCRGR
SRHTHVPMQRSLDEIRQKRHHSQSPTHYYNPQQEHRSGDSDYDYSEDSEVLEMHRSIRGG
SAECLHTNSSTLPACLKSKSTRRLEGGGVSPRSPAPQRVLRFTDEVGISDLQPSLDRVRS
ASTTCLRPESSFRSPDSLSGSLDRPVCAKTNKKSIDNDRIQPTSILRGSRWRRDGPIQSF
GHSSQDRVHLHGGRNSPTESPLSVRRGRQLPQLPAKSSSIEQALAVEERARQLSQVRVPS
YRPGSSASSGHDQDMDLKNKRDMYKRSCDNMSARSSDSDVSDVSAISRASSASRLSSASY
MSVQSERPHGRISRQVRASAGRNMLKSTSVSGDINTPERTDGSQSDTALGTVGSSGSKKR
RASLNARFVAIVGNRRSRSTSQISQTEASNKKSKGGGTIQRSQETGMAVELQRNMSRQPS
RESNNGSMASYNSEGSPIFPAVRVETQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMVN
KKGKLEVEVIRARGLIQKPGSKSLPAPYVKVYLLENGAYVAKKKTKIARKTLDPLYQQTL
QFEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLASNVIGWYKLFPPSSLVDPT
LASLTRRASQSSLDSSSGPGGVRS
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcggtagggccccagggtggcccgcgggcttcccttccggcttctatgcct
gacataccggacttgagccacctcacggaggaggagaggaaagtaatcctggcggtgatg
gcgcgccagaaggaggaagaggagaaggagcaagccatgttgaagacgcttcatcagcaa
ttcgagagctataaggagcaggtaaggcggatcggggcagagaacaaacggcaacaatcc
atccacaaggacgatgccccgacctgcgggatctgccgcaagaccaagtttgccgatggc
tgcgggcacctctgctcctactgccagaccaagttctgtgcccgctgtggtggaagagtg
tctctacgctccaacaatgtgatgtgggtatgcaacctgtgcaggaagcagcaggagatc
cttactaaatctggagaatggttctcatcagggccaagaggcaggcctctgagcgtggct
ggccctgaggctgaccgggacggaaagctgcgttcaaggtcgcaggttacagccggagct
aacctcgctactgctaacgacacccaaccagccactgaccggaccaagggagcagagatc
atgccagcctcacgagctcggagcgaacccccacgagagaagaagaggccagtgtcccta
catgagcagaatggcaaggtcattggcagaggtgagaggagagtggtaccaggcaggcag
ccaggtcaggctgcagaagatcgtgctccaggagaaaggcgagatatcaggcgtctggag
aaaggccattcgcaagaatatgaccaccctggtgacactgcccaccctgaccagaggcgg
agaaaagaagaagaggagcgggaaaggcagaggcgcgaagaggaataccaaaatcgctac
tgtagtgatcccaacctggcccgctaccctgtcaaacctcagaaagaagaacaagagatg
cgtatgcatgccaaagtgtccaaaatgcgacaagaacgtcaccacagtgacatggccatc
aatgaagtaggcctggctcaagatggttgtgagaccccaggcagccgactaagcaggagg
gcggtgggcaatgaaaaccggaaagcactactggaaaaccatcgggcatactctgtggac
aggaccgtggggggtagtgctggtggggggcctgttcctctacaaaaacagggtcatagt
gtttctcacatgagccccggaggctcccaagacctcagggatggacaagattggggactt
aaaggttacttggagcctggttcagcagcattactgcacaagaccaagcgtgagaaggct
gctgaaagcttccggaaagattcttctctcagttcagaccaatcagagtgtctccgacca
cctcctccccgtgcttacaggcccaaacgaggcctcaacaagaggcagatgtccattagc
agttcagaagaggagggagggtccacacctgagtatactagctgtgaagatgtggagatt
gagagcatcagtgaaaaaggtgactgggattgccatcctctagaccccactatatggcat
catcctgttacatggcagccatcaaaagagggagatcatttgatcggccgcatcactctg
agcaagcgctccgccgtgcctcgagaagctggctctctgctcgggctgaaggtggttggc
gggaaaattacagagactgggagacttggagcgttcatcaccaaagtaaagaaaggaagt
cttgcagatgttgtaggccatttacgagcaggtgacgaggtgttgcagtggaatgggaag
gcgttgcctggagcaaccgagaaagacgtgtacaacatcatcttagagtcacagtctgca
cctcaagtagaaatagtcgtttcaaggccaattggagacacaccaagaattccagagaag
tcacatcctcctcttgaatccactggttccagttcaatagatgagtctcacaaggtggac
catccctccatctccgtcatgtcccccaccagtccgggaatgttgagagatctgcctcag
gacctaccaggccagctttcagtgaaactgtggtatgacaaagtgggccatcagcttatc
gtcaacgtattacaagccatagacctgccttcacgtccagacggccgaccgcgcaaccct
tacgtcaaaatgtacttccttcctgatcggagtgacaagagcaagaggaggacgaagacg
gtgaagaagagctcggagccaaggtggaaccagacgttcctttactcacacgttcaccgc
agggacttcagagagcgcatgctggagatcaccgtgtgggaccagccgagagcgcaggag
gaggagagcgagttcctcggagagatcctgatcgagctcgaaaccgctctgttggacgat
cagccgcactggtacaagctgcagacccatgacgtgtcctctctccctctaccccaaccc
tccccgtacctcccccggagacacgttcacaacgacagccccagcaagaagttacagaga
tctcatcgcatcattgagactgattatgatgatgctattacggtagtgtcttcagcagca
gagaggaactccagagagagggagaggtgcagcactctgacggttcccgagaggcaggca
gccattcagcatcggtctcgctccgtctccccacacagagaggaccagtgcagaggacgt
tcacgccacacacatgtccccatgcagaggagcttggatgaaattcgccagaaacggcat
cattctcagtcacccactcactactataatccacagcaggaacaccgatctggtgactca
gactatgactactcagaggacagtgaggtcctggagatgcacagatcaatccggggtggg
agcgctgagtgcctgcacacaaacagctccacccttcctgcatgtctaaagagcaaatca
acacgacgactagaagggggcggggtctcacctcgaagccccgccccacagcgtgtgctc
agatttaccgatgaggtcggcattagtgatcttcagccgtcattggacagagtgcgaagt
gccagtacgacctgtttgaggcctgagagcagtttccgctcccctgacagcctttcgggc
agtttggacaggcccgtgtgtgcaaaaacaaacaagaaatctattgacaacgacaggatc
cagcccacctccatcctgcggggcagcaggtggaggagagatggcccaatccagtccttt
gggcactccagccaggacagagtacatctgcatggtggacgtaactcccctacagagtct
cccttgtcagtgcgcaggggaagacagctcccacaacttcctgctaagagcagcagtata
gagcaagctttggcagtagaagagcgagctcggcagttgagtcaggtgcgggttccatca
tatcggcccggctcgtctgccagctcaggccatgatcaagacatggatctgaagaacaag
agagatatgtacaagaggagctgtgataacatgtcggcgaggtcatcggacagtgacgta
agcgatgtgtcagctatctcgcgagccagcagtgcctctcgtctcagcagcgcaagctac
atgtctgtccaatcagagaggccacacggacggatcagtcggcaggttcgggcctcggcg
ggccgcaacatgttaaagagcacaagtgtaagcggcgacatcaacactccggagcgtacg
gatggcagccagtcagatacggcgctcggcacagtgggcagcagcggcagcaagaagcgg
cgcgccagcctcaatgcccgctttgtagccatcgtgggcaacaggcgcagccgcagcacc
tcccaaatcagccagacagaggcgtccaataaaaagtcaaagggaggtgggacgatacag
aggagccaggagacaggcatggccgtcgagctgcagcgcaacatgagtcgacagccgagt
cgcgagagcaacaacggcagtatggccagctacaactccgaaggaagtccgattttccca
gccgtgcgggtggagactcagttcagtgacttcctggatggactgggtcctgcccaactt
gtgggccgacaaactctggccactcctgctattggagacattcaaattggcatggtgaac
aagaagggaaagctggaggtggaggtgatccgagcccgtggcctcatccaaaaaccagga
tccaaatctctcccagctccgtatgtcaaggtttacctgctggaaaacggggcatatgtg
gctaagaagaaaacaaaaattgcacggaaaacactggacccgctgtaccagcagaccctg
cagtttgaagagagtccacaggggaaagtgttgcaggtcattgtctggggagattatggg
cgaatggaccacaaatccttcatgggagtagcacaaatcctactggaggagctggacctg
gccagcaacgtgattggctggtacaaactgtttccgccctcctccttagtagaccctacg
ctagcgtcgctgacaaggcgagcttcccagtcgtctctggacagttcttcaggacctggt
ggggttcgatcctag
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integrated database retrieval system
