Ictalurus punctatus (channel catfish): 108259108
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Entry
108259108 CDS
T04658
Name
(RefSeq) cadherin-17
KO
K06810
cadherin 16, KSP-cadherin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108259108
Cell adhesion molecules [BR:
ipu04515
]
Cadherins
Major cadherins
108259108
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
108259108
NCBI-ProteinID:
XP_017313812
UniProt:
A0A2D0Q522
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Position
27:7706566..7752484
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AA seq
820 aa
AA seq
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MNDMSSWIKVLNLLLYLSTLYGEAAHLRIGVPENYDGIFPWYLTKLPDLPLTYADLLVTG
DDEGIFGVESGFLYALKPLDREKKPSYSLQVSFMASMHPQSFSVEVCVIDKNDNVPMFLQ
ESMRGTVQLGLLKGIPFMQVGALDRDDRNTPHADLRFRLLDQMPRIPASHMFHVDATSGE
VSLTEDGASTLDPEMCGRYKLSVMVQDMGGKANAFFSTGTVLVEVTGNTWASPDPVRLQE
NLPGPYPIPISQVKWSGSLVAYSLEGEFPEMLFTISREGVIYLNAPLDRETQDQFLVSIV
AERPDGRKIAKPVELRVMVGDANDNRPTFPQMQYHTVVKELAQKGTEILTVQAADNDDPK
TDNVRIFYRLAGQVPESPRQLFRVDRDSGVITVQADSMEGTAPQYTLTIIAEDAKGLNSS
CTVIVKVLDENNNPPIFSQHEYGPFHLAEDAPVGATVTAVAAWDADEWSGDSWLVDYRLE
SGNEDEVFALVTDRQTNEVSLVLAKVLDFERESEYILVLSAQNPVALVRGRYGPASTATV
SIFIDDINEGPVLSQSHYEVTVREGEEPGRVIATIRAYDPDSHPVRYSLRGDTKKYFSIG
KYSGELKTVQALDREENSTYTMEVVAEDGRNSSLSASTLVTVHILDVNDNSPVLVGDYSW
KYLCTPHLEDQALVLASRDSDGPQHGGRLNFSLSSDPTVRRNWKLTPINDTHTNLSLNID
DLTPDVYTVPFTISDSSSPPRSTFINLPVTVCTCNVRGNCRTAAKQLAGMPTIQSTLGVL
LGTLGVIGIILIVIFVRLSYQKPPPTGKTNQETMPLHVSL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgtcttcatggatcaaagtactgaatctgctgctttacctgtctacttta
tatggagaagcagcacaccttaggattggtgttccagaaaactatgatggtattttccct
tggtacctcaccaagctgcctgatcttcccttaacctatgctgatctgttggtgaccggt
gatgatgaggggatttttggagtagagtcaggcttcttgtatgccctaaaaccactggac
cgggagaagaagccatcatactccttgcaagtgtccttcatggcatccatgcacccacag
agctttagtgtagaggtgtgtgtcatcgacaagaatgacaacgtgcccatgttcctgcaa
gagagcatgcgaggcactgttcaacttggcctgctgaaagggatcccgttcatgcaagtg
ggggctttagaccgtgatgaccgaaacacaccccatgctgatctgcgttttcgccttcta
gatcagatgcctcgcatcccagccagtcacatgttccacgtagatgccaccagcggggag
gtgtctctcacagaggatggtgcctctactctagaccctgaaatgtgtggtcgctataaa
ctttcagtgatggtccaggacatgggtgggaaggccaatgctttcttctctactggcact
gtgttggtggaggtgacagggaacacatgggcttcacccgacccggtccgattgcaggag
aacctaccaggcccgtaccctatccccatctctcaggtgaaatggagtgggagtttggta
gcatacagcctggagggagagtttccagagatgcttttcaccatcagtagagaaggagtc
atctacctgaatgcccctctggaccgagaaacccaagatcagttcctggtcagcatagta
gcagagaggccagatggcagaaagatcgcaaagcctgtagagctgagggtcatggtggga
gacgccaatgacaacagaccaaccttcccacagatgcagtaccacactgttgtcaaggaa
ctcgcacagaaaggaactgagattctcacagtccaggcagctgataacgacgaccccaaa
acggataatgttcggattttttacagattggcagggcaggtgccagaaagcccacgccaa
cttttccgcgtggaccgagattccggggtgatcacagtgcaggctgacagcatggagggc
actgcaccacaatacacactcacaatcatcgctgaggatgctaaagggctgaacagctcc
tgcactgtgatagttaaagttctggatgagaacaacaacccacctatcttctctcagcat
gagtacggcccgtttcacttggcggaggatgccccagtgggtgccactgtgacggcagtg
gcagcgtgggatgctgatgaatggagtggggacagctggctggtcgactatcgactagag
tcagggaacgaggatgaggtcttcgctttggtgacagatcgacagactaacgaggtctcg
cttgtcctcgctaaggtgctggattttgagcgggagagtgagtacattctggtcctgagt
gctcagaaccctgtggctctggtgagggggaggtatggacctgcatccaccgccactgtc
tccatcttcattgatgacatcaatgagggccccgttctgtcacagagtcactacgaggtc
actgtcagagagggcgaggagccaggacgggtcatagctacaattagggcttatgacccc
gactcccatccagtcaggtactcactgagaggggacacaaagaaatatttctcgattgga
aagtactcaggagagctgaagacagtgcaggctttggacagagaggagaacagtacctac
accatggaggtggtggctgaggatggacgtaactcatctctgtccgcctccacgctagtg
acagtgcatattctagatgtgaacgataacagccctgttctggtgggcgattactcctgg
aaatacctttgcactccacacttggaagatcaggccctggtcctagcatctcgggacagt
gatggaccgcagcatggtggccgcctcaacttctcactcagcagtgaccccacagtgcga
cgcaactggaaactcacacccatcaacgacactcacaccaacctttctctgaatatcgat
gatctgacccctgatgtttatacagtgcccttcaccatctcagatagtagctctcctccc
agaagcaccttcattaacttgcctgtaaccgtgtgcacatgtaacgtgagagggaattgc
cgcaccgcagcaaagcaacttgcagggatgcccactatccagtccacattgggagtcctg
cttggaactcttggggttatagggatcatactgatagtcatttttgtgagactgtcctac
cagaaacctccaccgactggaaaaaccaatcaggagacgatgcctctccatgtgtcactg
taa
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