Ictalurus punctatus (channel catfish): 108259116
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Entry
108259116 CDS
T04658
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259116 (irx6a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108259116 (irx6a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
108259116
NCBI-ProteinID:
XP_017313825
Ensembl:
ENSIPUG00000016893
UniProt:
A0A2D0Q8X2
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Position
27:complement(14492881..14498448)
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AA seq
491 aa
AA seq
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MVTKDAAMSFSQFGYPYNATSQFFVSSKPSTTCCDSISRSVPDGSSAPQAAAAAASFCCP
PACEKRLVSGARAELSAALGMYGSPYAPAHAYANYFQYGADSSAIYSTLNPQYDIKESTG
SLHSGISQPNAYYPYDHSLGQYQYDRYGTVDFNNSARRKNATRETTSTLKTWLYEHRKNP
YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAVDDKKDILDKTDQE
SVTKDSKECKEDRDLRLSDLDNIEDEDEDCEKSSQDMASLPLPSLPISSPPKRDCSSDLP
SPSSFPAFPCKVKGVMALVPDLDTSGSKQQTQQLPALHPASIGPISLPNFQVLDQKPRIW
SLARTAATGMTQHRQDLQTECQLQAARVPMVGRGGHCAGSKGLQDPTNLGNSESLFEEGA
PGLNKVYSAANYRGLQLHCSSYQAVTDSYQYSTMEGFCSGGKSETESSELSDACLTLQDA
KTTAFRPVMKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccaaagacgcagctatgtctttctctcaatttggatatccttacaatgcaact
tcacagtttttcgtgtcgtcaaagcccagtacgacttgctgcgattcgatttccaggtcg
gtcccggacggctcgagcgctccccaggccgccgcagccgccgcctccttctgctgtccg
cccgcctgtgagaagcggctggtatccggagcgcgcgcggagctgagtgcagcgctcggg
atgtacggctccccgtacgcgccggcacacgcttacgccaattacttccagtacggagcg
gattcctctgccatctactccacactgaatcctcagtacgatattaaggaaagcacagga
agccttcatagtggaatcagccagcccaatgcttactacccatatgaccactcactgggc
cagtatcagtatgacaggtatgggaccgtcgactttaacaactcagccaggaggaagaat
gccacacgcgagacgacaagcactctcaagacatggctttacgagcaccgcaagaacccg
tatccaaccaagggtgagaagatcatgctggccatcattaccaagatgaccctcacccaa
gtgtccacctggttcgccaatgcccgaagaagattgaagaaggagaataagatgacctgg
tcacccaagaataaggctgtagatgacaagaaggatatcctggataagacagaccaggaa
tctgtcaccaaagactctaaagaatgcaaagaggatcgggacctccgtcttagtgacctt
gacaacatagaagatgaggatgaggactgtgagaaatccagccaagatatggcctcgctt
cctctgccctctctgcccatctccagtcctccgaagagagactgcagctctgaccttcct
tccccgtccagcttccctgcattcccctgcaaagtgaaaggtgttatggcactcgttcct
gacttggacacttcaggctccaaacagcaaacacaacagcttccagctttacatcctgcc
tccattggtccgatttccctgcctaatttccaagtactcgatcagaagccaaggatttgg
tccttggccagaaccgctgctactggaatgacacagcacagacaggacttacaaactgaa
tgccagctacaagctgctcgggtgccaatggtggggagaggtgggcactgtgcgggttcc
aagggtctccaggaccccacaaacttggggaactctgagagcttgtttgaagaaggagca
ccagggttgaataaggtgtacagtgcagcaaactacagaggcctacaactccactgttcc
tcataccaggctgtgacagactcctatcagtactccactatggaaggattctgcagtgga
gggaagtcagagacagagtcctctgagctcagtgatgcgtgtctaacgctgcaggatgcc
aagacaaccgctttcagacctgtgatgaagaggtga
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