Ictalurus punctatus (channel catfish): 108259123
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Entry
108259123 CDS
T04658
Name
(RefSeq) low-density lipoprotein receptor-related protein 3
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259123
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
108259123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Motif
Other DBs
NCBI-GeneID:
108259123
NCBI-ProteinID:
XP_047007622
UniProt:
A0A2D0Q699
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Position
27:17155182..17174372
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AA seq
837 aa
AA seq
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MEANICNVSHGITCASHMMLKVGGMKLFLMKCLLFLRWAWLCLAACGGTVELHTERRGVI
YSPSWPLNYPAGVNCSWNIQGNRGEVITISFHSFDVEESGGCRGDWLLLGPTWKDEYRVC
GSALPPPFISSRGAVWLHFHSQTNSSGLAQGFRLSYIRSRLGESSCESDEYLCGNGKCVP
RSWRCNALDECGDNTDERNCIGPPTPARASLCAPGTLECSLAQSTRCLPSALRCNGVHDC
PDGSDEAQCPDMVCGKRLANFYGMFASPDFFRPNRSTGTDLYCTWFLDTQDPKPLLLRLD
LQLGAGDSVRVYDGLGERAERLLQSLTHHNNQHSAVLESSQGQMSILYHAKPHSQGHGFN
ASYQVKGYCFPGEFPCGPDEGCYSQHQRCDGYWHCPSGRDEEGCALCGPGQYPCQGAGGA
CYSAHERCDNQKQCPDGSDEKNCFSCQPGTFHCATNLCILETWRCDGQEDCTDGSDEHEC
QAAVPRKVITAALIGSLACGLLLVIALGCAFKLYSLRTREYRAFETQMTQMEAEFVQREA
PPSYGQLIAQGLIPPVEDFPAYNPAQASVLHSLRSAMRRQMRRHSSRRMASRRRLGRLWS
RLFQRGSRLRGHILLLTPPGRGHTPSQTHPLPSGHSHVSSRTGNSSHCAVEGQGGEWVDL
QAHAEALCLAESGSPASSPTSPALPRSTSDTLEDDDDDDDDDENDDEDRDRASGLRPRDE
SRSHGAPRRPSRLPFQSRASRRVVQGLAAELGTTPVTRYSALGISPLSTSESLTSSSSQN
EEDMSSPTHADPCSNTHTDPHTDLNTHSVGDKSVTRNGTRSGHTSSDEDEDDVLFTR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaacatctgcaatgtgagccatggaatcacctgcgcttcccacatgatgctg
aaggtcggagggatgaagcttttcctaatgaagtgcttgttattcctgcgctgggcatgg
ctttgtttggctgcttgcggtgggacggtggagctgcacacggagagaagaggagtgata
tacagtccatcctggcctctgaactatcctgccggagtcaattgctcctggaacatccag
gggaaccgtggcgaggtcatcactataagcttccacagttttgacgtggaggagtcgggg
ggatgtcggggagactggctgctgctcggccccacgtggaaagacgagtaccgcgtatgc
ggctcggccctgcctcctccgttcatctcctccagaggtgcggtgtggctccactttcac
tcgcagaccaacagctcgggactggcgcaaggcttccggctctcctatatacgcagtcgt
ctgggagagagcagctgtgagagtgatgagtatctatgtggtaatgggaagtgtgtgcca
cgctcctggcgctgtaatgcgctggatgaatgtggagacaacacggatgagagaaactgt
attggccctcccacgcctgcccgggccagtctgtgcgcccctggtacactggagtgcagc
ctcgctcaatcgacccgctgcctgccctcagcactccgctgtaacggcgtccacgactgc
cccgacggctccgacgaggctcagtgtcccgacatggtgtgtggaaaacggctagccaac
ttctacggcatgttcgcctcgcccgatttcttccggccaaaccgcagcactggcacggac
ctctactgcacctggttcctggacacgcaggacccgaagcctctgctgctgcggttagac
ctgcagttgggagcgggcgattcggtgcgtgtgtatgacggtcttggggaacgagccgag
cgtctgctgcagagtctcacacaccacaacaaccagcattcagccgtgttggagtcctcg
caggggcagatgagcatcctgtaccacgccaaaccgcacagccaggggcacggcttcaac
gcctcctaccaggtgaaaggttactgtttcccgggtgagttcccgtgcggtccagacgag
ggctgttactctcagcatcagcgctgtgatggttactggcattgcccgagtggccgagac
gaggaggggtgtgcgctgtgtggcccgggtcagtacccgtgccagggggccggaggtgcg
tgttactcggctcacgagcgctgtgataatcagaaacagtgcccagacggctcggatgag
aaaaactgcttctcctgtcagccgggaacgtttcactgcgcgactaacctgtgcatcctg
gagacgtggcgctgtgacgggcaggaggactgtactgacggcagtgacgagcacgagtgc
caggctgcagtgccacgcaaagtgatcacggcggcgctgatcggcagcctggcctgcggc
ttgctgctcgtcatcgccctcggctgtgctttcaaactctactcgctcagaacgagggag
taccgagcttttgaaacccagatgactcagatggaggcggagtttgttcaaagagaagcc
ccgccctcatatggtcagctgattgctcagggtctcatcccacctgtggaggattttcct
gcttataatcctgctcaggcgtccgttctgcacagtctccgctcggccatgcggagacag
atgaggcgtcattcttcccgacgaatggcgtcgcgccgcagattaggtcgcctttggagt
cgtctgttccagcgcgggagtcgactgcgtggtcatatcctcctccttaccccaccaggg
cggggacacactccatcacagacacaccctctgccgtctggtcactcgcacgtcagctct
cggactgggaatagcagccactgtgctgtagaggggcagggcggcgagtgggtggacctg
caggctcacgccgaggctctgtgcttagccgaaagcgggtcgccagcgtcatcgcccaca
tcaccagccctgccccgctccacctcggacacgctggaggacgacgacgacgacgacgac
gacgacgagaacgatgatgaagatcgcgatcgagcatcaggtcttcggcccagagatgag
agcaggtcacacggagctccacgtcgaccctcacgtctaccgtttcaatcacgagcatcc
aggagggtcgtccagggactggcggcggaactgggaaccacgccagtcacacgctactcc
gcactgggaatctctcctctgtccacttctgagtctctgacgtcatccagcagccagaac
gaggaagatatgagttcaccgacacacgccgatccctgctcaaacactcacactgaccca
cacactgaccttaacacacactcagttggagataaaagcgtaacgcgaaacgggacgcgg
agtggacacacgagcagtgacgaagacgaggatgatgttctgttcacgcgctaa
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