Ictalurus punctatus (channel catfish): 108259193 Help Entry 108259193         CDS       T04658                                  Symbol acana Name (RefSeq) aggrecan core protein isoform X1   KO K06792   aggrecan 1 Organism ipu  Ictalurus punctatus (channel catfish) Brite KEGG Orthology (KO) [BR:ipu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:ipu00535]     108259193 (acana)    00536 Glycosaminoglycan binding proteins [BR:ipu00536]     108259193 (acana)    04091 Lectins [BR:ipu04091]     108259193 (acana) Proteoglycans [BR:ipu00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    108259193 (acana) Glycosaminoglycan binding proteins [BR:ipu00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    108259193 (acana) Lectins [BR:ipu04091]  C-Type lectins   Lecticans    108259193 (acana) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi EGF V-set hEGF EGF_TEN Motif Other DBs NCBI-GeneID:  108259193 NCBI-ProteinID:  XP_017313906 Ensembl:  ENSIPUG00000022176 UniProt:  A0A2D0Q864 LinkDB All DBs Position 27:complement(9891106..9906402) Genome browser AA seq 1598 aa AA seqDB search MTSLLLLCLCLRVISAKLTYHDYLHMEPETLSVSIPIAQPLQPLMGDTLVLPCYFLDDTA PDPGAPTIAPLSHRIKWSISTKETTTDILVASEGIVAVNEKYTDRVQMVAYPTSPTDATI KITQLLSNESGVYRCEVMHGIEDSHDSVNVQVQGIVFHYRAITSRYTLTFEKAQAACIQN SAVIATPVQLQAAYDTGYHQCDAGWLSDQTVRYPIHEPREECYGDKYEYPGVRTYGVRDV NETYDVYCFAEKMSGRVFYSTCPEKFTFAEAQAQCAKLGAKLATTGQLYLAWKAGMDECN AGWLADGSVRYPINIARPQCGGGLLGVRTVYRFINQTGYPLPESRYDAICYTDEEEEGSA ISNIFPDIQTTEATNDVVSVDMVTDSPPVFITQTSTESELKGQVETHKPPTTTADSWSVE QNVTQLPLSSPPSIIDDLIKVVTAQPEIGSEIPEENATSLTGVVFLFRLSHSRYAFTFSE AHLACQNIGAVIASPQQLQAAYEAGYHQCDAGWLIDQTVRYPIISAREKCSGDLEDLSGV RSYGIRPANEHYDVYCYMDKPRGNVFHVSSFEGFTYDEAMAYCQAQNASLASTADLYVAW KQGFDKCRAGWLIDHSVRYPINNPRPRCGGGKSGVHTVFKFPNQTEYPDVHSKFDAYCLK VDFQLYLNETGLNMTLIEEELVNLTSRTDLSIPVNPTITPPIPVDFSGSGSADQSSGTSG FSGDVSASGSGEQPSGAHYKEGELSGSGLPNGSAGLGEEISGSGQPNGSSGLGEEISGSG QPSGFSGLGGELSGSGQPSGSSGLGEEISGSGQPSGSSGLGGEISGSGQPSESSGLGEEL SGSGQPSGSSGLGGKLSGSGQPSGSSGLGGELSGSGQPSWSSGLGGELSGSGQPSWSSGL GGELSGSGQPSESSGLEGELSGSRLPSGDMSGSDLSGDDSGISVTFSGIDTILSGDASAS RTRQEAGEGSAAILTFMSGMGSGFFSGDGSGSESGSSFGLEESGSTSDIFNILGESRSGE SSGISSGLGSSWEFSGFSGFSSGLISSGDDSGFSGLSSSGEIMVKGQWVEVSTAPTLTAQ ELGGSHMHISGSGDLHESGLSGSSVSGIGDLSSSGSGSGFPSITFLDSGFTDLIDLSSRE QEASGLLMYGSGEGSGDFSGVSGLPSGGTSEASASGNIISFTDESMVEVSFRSTQNQELR KGPIEQSGRESGPFFSSGDRHTTVSSEDHHPTSLPHEDPIHSTDEPTVLVPSGLFSNSAR PQEILSNAAEPFWEYDSVTPASMAGTTTDPAFSMKTPTVLEVPAMEEAAVDPCNPNPCGA AACFVQDGVGMCRCPPGVKEEKCHAEVDVCHSNPCANGATCVEVQDAFKCLCLPSYGGDR CEIDIDTCEEGWTKFQGNCYLHFSERTVWEEAELQCRSLGAHLVSITNQEEQVFVNSHAQ DYQWIGLNDKTFENDFQWTDGTPMQYENWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPC NYHLPFTCKTGPVTCGQPPELKNGRWFGTKKEHYQVNSIIRYQCNDGFRQRHPPVVRCMA DGHWQKPQVECIPQIKRRLLKRSIRRESAKRTSLRKQL NT seq 4797 nt NT seq  +upstreamnt  +downstreamnt atgacatcattgctgttactgtgtttgtgtcttcgggtaatttctgcgaaattgacctat catgactacttacatatggaaccagaaaccctgagtgttagtattcccattgctcaacct ctccaacccttaatgggagatacactggttctgccctgctatttcctggatgacacagcg cctgacccaggtgctcccaccatagctcctttgtcccatcgcatcaaatggagcatcagc accaaagagacgaccacagacattttggtggccagtgagggtatcgtggcagtgaacgag aagtacacggacagggttcaaatggtggcataccccaccagccccactgacgccaccatt aaaatcacacagcttctttcaaatgagtctggagtgtatcgttgtgaagtcatgcatgga atcgaagacagccatgattctgtcaatgtccaggtgcaaggcattgtgttccattaccgt gccattacttcacgttacaccctgacgtttgagaaggcacaggcagcctgtattcagaat agtgctgtgattgccacacctgtgcagctacaggcagcatatgatacagggtaccaccag tgtgatgctggctggctttctgaccaaactgttaggtatcctatccatgaaccccgagag gaatgctatggtgacaagtatgaatacccaggagtgagaacgtatggagtaagagatgta aacgagacctatgatgtgtattgctttgctgagaagatgtcagggagggtgttctattca acatgccctgaaaagttcacctttgctgaagctcaggcccagtgtgctaagctgggtgct aaattagccacaactgggcagctctacctggcctggaaggctggtatggacgaatgtaat gcaggctggttggcggacgggagtgtccgctatcccataaacattgcccgaccacagtgt ggaggaggtctactgggtgtgcgcactgtgtaccgattcattaatcagacaggctaccct ctaccagaatcaagatatgatgctatctgttacacagacgaggaggaagagggctcagcc atatccaacatcttcccagatatacagactacagaggctacaaatgacgtagtaagtgtg gatatggtgacagacagcccaccggtgtttattacgcagacctccactgagagtgagcta aaaggccaggttgaaacccacaaaccccccaccaccactgctgactcctggtctgtggag cagaatgtcacacagctgcctctgtcttcaccacccagtatcattgatgaccttataaaa gtggtgactgcacaacctgaaattggatcagagattcctgaggaaaatgcaacttcactt actggtgttgtcttcctcttcagactaagtcacagtcgctatgcttttaccttttctgag gctcatctagcctgtcagaacattggtgcagtgattgctagtcctcaacagttacaggct gcctatgaagctggctatcaccagtgtgatgcaggctggctgattgaccagacagtgagg tatccaatcatatctgcacgagagaaatgttctggtgatttggaagatttgtccggtgtg aggtcttatggtatacgacctgccaatgagcactatgatgtatactgctacatggacaaa ccaagagggaatgtttttcatgtgagttcatttgagggtttcacatatgatgaagcaatg gcttattgccaggcccaaaacgcctccttggcctccacagctgatctgtatgtggcctgg aagcaaggctttgataagtgtcgtgctggctggctcatcgaccacagtgtccgctatccc attaataatcccaggcctcggtgtggaggagggaaatctggagtccatacagtctttaag tttcccaatcagactgaatatcctgatgtgcactccaaatttgatgcctactgcttgaaa gttgatttccaattatatcttaatgagactggattgaacatgacacttattgaagaggaa ttggtgaacctgacctcaagaactgacctttctatacctgtgaaccccaccattactcct cccattcctgtggacttctctggttctggttcagcagaccagtcatctgggaccagtggc ttttctggtgatgtatcagctagtggaagtggggagcagccgagtggggcacattataaa gaaggagaactttcaggatctggacttccaaatgggtctgcaggtttaggagaagaaatt tcaggatctggacagccaaatgggtcttcaggtttaggagaagaaatttcaggatctgga cagccaagtgggttttcaggtttaggaggagaactttcaggatctggacagccaagtggg tcttcaggtttaggagaagaaatttcaggatctggacagccaagcgggtcttcaggttta ggaggagaaatttcaggatctggccagccaagtgagtcttcaggtttaggagaagaactt tcaggatctggacagccaagtgggtcttcaggcttaggaggaaaactttcaggatctgga cagccaagcgggtcttcaggtttaggaggagaactttcaggatctggacagccaagttgg tcttcaggtttaggaggagaactttcaggatctggacagccaagttggtcttcaggttta ggaggagaactttcaggatctggacagccaagtgagtcttctggtttagaaggagaactg tcaggatctagactgccaagtggagacatgtctggctcagaccttagtggtgatgactca ggcataagtgtgaccttctcaggaattgacacaatattgtctggggatgcatcagcttca aggacacgtcaggaagctggggagggaagtgcagcgatcctcactttcatgtcaggtatg ggttctggttttttcagtggggatgggtctggatcagaaagtggctcaagttttggttta gaagagagtgggtctacgtcagacattttcaacatcttgggagagagcagaagtggagaa tcttctggcatttcttcaggccttggttctagctgggagttctctggattcagtggtttt tcatcaggtttgatatcctctggagatgacagtggcttctctgggcttagtagcagtggt gaaatcatggtgaaaggtcagtgggtggaagtgtccactgctccaaccctcacagctcag gagctgggtggaagtcatatgcatatcagtggatctggagatctacatgagtctggtttg agtggctctagtgtgagtggaattggtgatttaagcagctctggaagtggttcaggattt ccttccatcacctttttggactcaggctttactgatctcatagacttatccagcagagaa caagaggcttctggacttttgatgtatggatcaggggaagggagtggtgatttctctgga gtctctggtcttccatcaggaggcacatcagaggcatcagccagcgggaatattatatca tttactgatgagagcatggtggaagtttcttttagatccactcaaaaccaggagctcaga aaaggaccaattgagcaaagtgggcgggagagtggaccattttttagcagtggggaccgc catactactgtttcaagcgaagatcaccatcccacatccctccctcatgaagacccaatt cattcaactgatgaaccaacagttctagttccctcagggctgtttagtaacagtgcacgg ccacaagaaatcttgtcaaatgctgctgaacccttctgggaatatgattctgtgactcct gcatctatggctggcaccactacagaccctgccttttcaatgaagaccccaactgtctta gaggtcccagccatggaggaagctgctgtggacccatgtaacccaaacccctgtggtgct gctgcgtgttttgtgcaggatggggttggcatgtgtcgctgcccacctggggtgaaggag gaaaagtgccatgctgaggttgatgtgtgccattcaaacccttgtgccaatggagctacg tgtgtggaggtacaggatgctttcaaatgcttatgcctgcccagctatggaggggatcgc tgtgagatcgacatagacacatgtgaggagggctggactaagtttcaaggtaactgttac ctgcacttttcggagagaacagtgtgggaggaggctgaactacaatgtcgaagccttgga gctcatctggtcagcatcaccaaccaagaggagcaagtattcgttaattcccatgcacag gattaccagtggattggactaaatgataagacttttgagaatgacttccagtggacagat ggaaccccaatgcaatatgagaactggaggcctaatcaaccggataactatttcaactct ggcgaggattgcgtggtgatgatctggcatgaaaacgggcagtggaatgacgtgccttgt aactatcatctaccattcacatgcaagactggcccagtcacatgtggccagcctcctgaa ctaaagaatggcaggtggtttgggactaagaaggaacactatcaggtcaactcaataatc agatatcagtgcaatgatggcttccgacaacgccatccacctgtagtccgctgcatggca gatggacactggcagaagccacaggtggaatgcataccccaaatcaaaagaagactactg aagagatctattaggcgtgaatctgctaagaggacatcactgaggaagcaactctaa

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