Ictalurus punctatus (channel catfish): 108259199
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Entry
108259199 CDS
T04658
Symbol
si:ch211-288d18.1
Name
(RefSeq) USP6 N-terminal-like protein isoform X3
KO
K20133
USP6 N-terminal-like protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259199 (si:ch211-288d18.1)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108259199 (si:ch211-288d18.1)
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
108259199
NCBI-ProteinID:
XP_017313920
Ensembl:
ENSIPUG00000022314
UniProt:
A0A2D0Q967
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Position
27:complement(9745589..9784928)
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AA seq
621 aa
AA seq
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MKKDIEVLIAEERAQIICKYDKGREEGVEIDPWEDADYSIYKVTDRFGFLHEEELPTPTL
LEEKRKQLEIERVQKWLKMVKKWEKYKNSERLMKRVYKGIPLQLRGQVWSLLLDVEKVKK
ENEGKYERMIEQAKIYSTEIKQIDLDVNRTFRNHIMFMDRFGVKQKSLFHVLTAYSVYNT
DVSYCQGMSQIAAILLMYMNEEDAFWAMSQLLTNQKHAMHGFFIPGFPKLQRFQNHHDQI
LYKLLPKLKKHLDKEQMSSGIYSTKWFLQCFIDRTPFTLTLRLWDIFILEGEKILTAMAY
TILKLHKKRLLKMSLEELREFLQEKIAESFDLSDDIVIEQLQVSMTELRKMKLDLPSPAK
PDELPRKPLGVERPVLLTPMRPHNPNLDQETPDKSQLAKQPPASLQISLQESIVPDQSSP
ECKWPYQDREIDSESPFPSPDPVLVHTEIIFGPGGVMEGPEEQPPPYEPPKNAGTDNSSL
SSHLAMNTCGTSTESAHLDAPQDISQGTLQATVEDGLFVMHPSKCQLTLSTASVQDSQYE
KLADTELVETREEKRFVSEKSMVLTQNSAFIKIPHTDSAQQSSSPHREVSLSTAGRKLMT
VHSDPLFERHDLPSLPKSETF
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggatatagaggtgctgatagctgaggaacgtgcacagatcatctgtaaatat
gataagggcagggaggagggtgttgagatcgacccttgggaggatgccgactacagcatt
tacaaggtcacggatcgatttggcttcctgcatgaggaagagcttcccactccaactctt
cttgaagagaagagaaagcagctggagattgaacgcgtacagaaatggttgaagatggtc
aaaaaatgggagaagtacaaaaacagtgagcggttgatgaagagggtgtacaaggggatt
ccactgcagctgcgaggtcaagtctggagcctactactggatgtggagaaagttaagaag
gagaatgaagggaaatatgagagaatgatcgaacaagccaagatctactccacagaaatt
aaacagattgatcttgatgtgaacaggaccttccgaaaccacatcatgttcatggatcga
ttcggagtaaagcagaagtctctgttccacgtgctcactgcttactccgtatacaacacg
gatgtgagctactgccagggtatgagtcagatagctgccattctgctgatgtacatgaat
gaggaagatgcattctgggccatgtcccagctcctgaccaatcaaaaacacgctatgcat
ggcttctttatccctggatttcccaaactgcagagatttcagaaccaccatgatcagatt
ctgtacaaactcctccctaaactgaagaagcatctggacaaggagcagatgtccagcggc
atttacagcactaaatggttcctgcagtgttttattgaccggaccccgttcaccctgacc
ttacgcctgtgggacatctttatccttgagggagagaagatcctcacagccatggcctac
accatccttaaactgcataagaagcgtttgttgaagatgtcactggaggagctgagagag
ttcctacaggagaagattgctgaatccttcgatctcagtgatgatatagtcattgagcag
cttcaggtctccatgacagaattgcgcaaaatgaagctggaccttccttctccagctaag
ccagatgagctgccacggaagccacttggtgtggagcggcctgtactgctgacccctatg
cgaccccacaacccgaacctggatcaggaaacaccagacaagagccagctagccaaacaa
cctcctgcttcacttcagatctcactccaggaatcgattgttcctgatcagagctctcca
gaatgtaagtggccctatcaggatagggaaatagacagcgaatctccatttccctcccct
gacccggtgctagtgcatactgagatcatttttggcccaggtggagtgatggaaggtcct
gaagagcaaccaccaccgtatgagcctcctaaaaatgctggaacggataactcttcactt
tcttcccacctggccatgaatacttgtggaacttcaacagaatcagcacatttagatgca
cctcaggacatttcgcaaggaactttgcaggcgacagtggaggatggtttatttgtaatg
cacccaagcaagtgccagttgacattatctacagcctcagtgcaagattcccaatatgag
aagcttgcagatacagaattggtggaaacaagagaagagaaaagatttgtgtcagagaag
tctatggtattaactcagaactctgcttttattaaaattccccacacagactctgcacag
cagtcatcttccccacaccgagaagtttcattatccacagctggaaggaaactgatgact
gttcactcagacccgctgtttgagcgccatgatcttcccagtctgcccaaatcagagact
ttttaa
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