Ictalurus punctatus (channel catfish): 108259228
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Entry
108259228 CDS
T04658
Name
(RefSeq) piezo-type mechanosensitive ion channel component 1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259228
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108259228
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108259228
Ion channels [BR:
ipu04040
]
Other channels
Mechanosensitive channel (Piezo)
108259228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
108259228
NCBI-ProteinID:
XP_017313986
Ensembl:
ENSIPUG00000023612
UniProt:
A0A2D0Q8E2
LinkDB
All DBs
Position
27:complement(6847600..6973373)
Genome browser
AA seq
2502 aa
AA seq
DB search
MELQAICGLLYCFLLPSALLAACLFRYNALSLVYLLYLLLLPWFTWPNKHTAQGHTGRFV
IALFSTSLLFLLAHVCFQICLYTVPGLDDALGHNCSTWETLSRHIGVSRMPLGDPWNTVR
LLSPDLGVFVMSLITMVLCKRLLKRREEASAAHGFHQEETQTDEEEEEEEDEEGEREEEE
DRKAEKTRVPAQLCARLKATAQRFLHNMGRVLAVTLLGLAGITLPSAFSSVYFLLFIIVC
TWWACHLPISHLGFNALCVMVGLFTAGHLVCLYLYQSTVAQSFLTPSSLWARLFGLKDII
SPFNCSSHSDELLFNTRHDWPVYVNPGILFLLYITVVTVLKMSSRDYLEKNKGVGEEVEL
MPWGGGRITPEDDTKRMLLATGESPEQETDTSGAKAHGTNGSSQHDLGPSSETVQQQQQQ
QQQDSPVRLVWRMIMQQSYVCALIAMMVWSITYHSWLTFVLLLWACVIWMLRARRRFAML
CSPFILLYGLGLCCLQYVWAMDLERELPKHLGYMSLKQMGLDQAPYPCLRLGAMLLFTLT
FWLLLRHSVKDKFGRKKKQNVTLEEVTTGESMGQDDSTLKLLGRVVMSLYAKYWIYVCGG
MFIMVSFAGRLVGYKIVYMLLFLLCMCLYQVYYSLWRRLLKPFWWLVVAYTMLVLIAIYT
YQFEDFPDYWKNFTGFTEDQLGDIGLETFKLSELFSSILIPGFFLLACILQLHYFHKSFM
KITDLEHVTPLHRKRSALKTEGGNFAEEELNTELGDDESEDGVMVPSKWGLVMDRLMVLF
RKFFDILTHIQAFLWRVLELHILKIVALFVIWVALSEPSVMNLVLVVLWSFALPFTRFRP
MASCLSTIWVCVIIVCKMLYQLSAVKPEVYSNNCTEPLSNETSMNTDEIQNSILYKAPVD
PANWFGFRKHYTALDYSKNHLLVLLLLVFEATVYRHQIHHYKRVQRSPPSIPAIFPQSTR
DKLDEGLLPCIRYLLNFSFYKFGLEICFLMTVNVIGQRMNFLVIIHGCWLVAIMVRRRRE
AIAQIWSKYCIFLVIFMIYQYILCVGIPPALCIDYPWRWKSSVTVNSALIKWIYLPDFYT
IPNSKNLIADFLLLMCASLQWTVFENEKKEEWIVMGGENKDNPDPMEDMLFNPAPNFINC
RSYLDMGKVLVFRYMFWFVLAVVFVTGSTRISVFGLGYLLACFFFLLYGRRLMIKPSRTR
LLMWDCLIIYNVGVIIAKNVLSILACVFVAEMQARFCWVINLFSLVCTVKGYYDPTSLSD
KECTLPIEEAGIIWDSICFFFLLLQRRVFLSFYFVHVTADLQASAQQASRGFELFNASII
KNVRFYQQNEKKSIQQLKSSMKRIRDKQQRYKEGRKLSEREQQPSESQEERKEKKKNKKE
WYRPWIDHATVLHSGDYYLFESDSEDEDLFEEEQKHHKQTAFQMAYQAWVSSAKQVLKDR
QKRQKEQRRERERNLLASQGSGDAEESEHVFEEKTSPEEEKEAGEEEEEESGSGRDTVQR
ILDVLKFLWVLCLAMVDSFTLWLNLLTKQYVDTSTVLCEERYLLIHNVNQGPASEPTDDQ
LSEDSESLTLDTCLDETDTDLLNISHTASADELDDIIESEDPRAHSSMTLCSQPTIELEL
EIHHRKSRTASELLSDRHYAIEELVQSREFYASQNRLLKLIFALCNVVAGHSELVCYFII
VLNNVVTASVISLVLPILIFLWAMLSVPRTSKRFWMTAIVYTEVMVVVKYLFQFGFFPWN
SEYELKLNENKPYFLPRILGLDKTDNYIRYDLLQLLALFFHRSLLQRYGLWDREGPLEEK
STEEKKKKKKVEEMIEDKTAEPDEAESPTDITTETQTEPEENPNAEITPEPEEPKKKGGF
LRLRKKKSSDKDATAKETKKKKKAKGQRRKEASKKLKDFGEKLKGFFISVVMNTYKPAKT
FIQNILHTEYRAATDVYALMFLTDVVDFIVIVFGFWAFGKHSAAADIATSLSDDQVPEAF
LVMLLIQFSTMVIDRALYLRKALLGKLIFQVILVLGIHIWMFFILPAVTERMFSQNFVAQ
LWYIVKCIYFTLSAYQIRCGYPTRILGNFLTKKYNHLNLFLFQGFRLVPFLVELRAVMDW
VWTDTTLSLSNWMCVEDIYANIFIIKCSRETEKKYPQPKGQKKKKIVKYGMGGLIIFFLI
CIIWFPLLFISLVRSVVGVVNHPVDVTVTVKLGGYEPLFTMSVQQQSIQPFTEKDYDRLT
EQFGNNAVAMQFITLYSYEDIVTANIDGSSGSVWRISPPSRQEVIKELLNSPADMTLRLA
WNFQRDLGKGGTVENTYDKYAISLEPGDPVRANLASLLLGNRTEPVRVPHMFPNYIRAPN
GAEAKPVSQLYDGEEEGYQDVTLSLMRDGSLNGTGAQEWWDISIADCDVSAGACGVLPMV
IFNDKVSPPSLGFLAGYGIMGLYVSVVLVIGKFVRGFFSEISHSIMFEELPCVDRILKLC
TDIFLVRETGELELEEELYSKLIFLYRSPETMIKWTREKDDN
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcaggcgatctgtggcctgctctactgctttctgctgccctctgcactgctg
gcagcttgtctgtttcgctacaacgccctttcattagtctaccttctgtacctgcttctg
ctgccatggttcacctggcccaacaaacacacagcacaaggacacaccggccgattcgtc
atcgctctgttcagcaccagtctgctgttcctgctcgctcatgtgtgtttccagatctgt
ctctacacagtgcctggcctggatgatgctctgggacacaactgtagcacatgggagact
ctgtcgaggcacatcggggtgtccagaatgccgctgggcgatccctggaacaccgtgcgt
ctcctttccccggacctgggtgtgttcgtcatgtctctgatcaccatggtgctgtgtaag
cgtttgctgaagaggagagaggaggcgtccgcggcgcacggcttccatcaagaggagacc
caaacagacgaagaagaagaggaggaggaggatgaagaaggcgagagggaggaggaagag
gacaggaaggcggaaaagacaagagtaccagctcagctgtgcgctcgcctcaaagccaca
gctcagcgtttcctccacaacatgggcagagtactggccgtcacgctgctggggctggct
ggtatcacattgccctcggcgttctcctccgtctacttcctgctcttcatcatcgtgtgt
acctggtgggcctgccaccttcccatcagccacctgggcttcaacgcactgtgtgtgatg
gtgggcttgttcacagcggggcacttggtgtgcttgtacttgtaccagagtacggtggcg
cagagcttcctcaccccgagcagcctgtgggccaggctttttggccttaaggatatcatt
agcccttttaattgctcctcccactctgatgaactcttgttcaacacacggcatgattgg
cctgtgtacgtcaatccaggcatcctctttcttctctacatcaccgtcgtaacagtcctg
aagatgagcagtcgtgattacctagaaaagaataagggcgtgggagaggaggtggagcta
atgccatgggggggaggccgaataacccctgaagatgacactaagcgaatgttgctggct
acaggtgaaagtcctgagcaggaaacagacaccagcggtgccaaagcccacggcacaaac
ggttccagccaacacgacctaggtcccagctcagagacagtgcagcagcagcagcagcag
cagcagcaggacagtcctgtacgattagtgtggcggatgatcatgcagcagagttacgtc
tgtgctctcatcgccatgatggtatggagcatcacctaccacagctggttgacgtttgtg
ctgctcttatgggcgtgtgtgatctggatgctgcgagcacgccgccgcttcgctatgctc
tgctcacccttcatcctgctgtatgggcttggcctgtgctgcctgcagtacgtctgggcc
atggacctggagcgcgaactgccaaagcacttgggttacatgagcctgaaacagatggga
cttgaccaagcgccttatccctgcctacgcctgggagccatgctgctgttcacgctgacg
ttctggctgcttttacggcactcggtaaaggataagtttgggaggaagaagaagcagaac
gtcacactcgaggaggtcaccactggagagagcatgggccaggatgactccactctaaag
ctgctgggaagagtggtgatgagtctttatgctaagtattggatctacgtgtgtggaggg
atgttcatcatggtcagttttgccgggaggctggtgggctacaagatcgtctacatgctg
ctgtttctgctctgcatgtgcctctaccaggtgtactactctctatggaggaggctacta
aagccattctggtggttggtggtggcctacaccatgttggtgcttattgccatctacacc
taccagtttgaggactttccagactactggaagaacttcaccggcttcacagaggatcaa
cttggagatattggcctcgagacgtttaagctgtccgagctgttcagcagtattctgatt
ccaggcttcttcttgttggcctgcatcctgcagctgcactacttccacaagtccttcatg
aagatcacagacctggagcacgtcacacctctgcacagaaagagatctgccctgaagacg
gagggaggaaactttgcagaggaagagctgaacacagagctgggagatgatgagtcagaa
gatggagtgatggtgcctagtaagtgggggctggtgatggacagactcatggtgctcttt
aggaagttcttcgacatcctcacccacatccaggcttttctctggcgtgtcctggagctc
cacatcctcaaaattgttgctctgtttgtcatctgggtggcgctttcagagccatctgtg
atgaacttggtgttggtggtactgtggtcattcgcgctgcccttcacccgtttcagaccc
atggcctcctgtctgtccaccatctgggtttgcgtcatcatcgtctgcaagatgctgtac
cagctcagcgccgtcaaacccgaggtgtactccaacaactgtacagagcctctgagtaat
gagacgagtatgaacactgatgagatacagaactcaatactttacaaagcacctgtagat
ccagccaactggtttggctttaggaagcattacactgctttagactacagtaagaaccat
ctgctggtgcttctgttgctggtgtttgaggccacagtgtaccggcaccagatccatcac
tacaagcgggtacagcgttctcctccttccatcccagccatcttcccacagtccacacgt
gacaaactggacgagggcctgttgccctgcatcagatacctgctcaatttcagcttctac
aagttcggccttgagatctgcttcctgatgactgtgaatgtgattggccaacgcatgaac
ttcctggtcattatccacggatgctggttggtcgccatcatggtgcgtcgtcgccgcgag
gccatcgctcagatctggtctaaatactgcatcttcctggtcatcttcatgatctatcag
tacatcctgtgtgtgggaatacctcctgccctctgtatcgactacccatggagatggaaa
agctcagtcactgtcaactcggctctgattaaatggatctacctgcctgatttctacacc
atccccaactccaagaacctcatcgcggacttcctgctgctaatgtgtgcctcgctgcag
tggacggttttcgagaacgagaagaaagaggaatggatagtgatgggaggagagaataag
gacaaccctgatcccatggaggacatgctgtttaatccagctcctaatttcatcaactgc
agatcttacttggacatggggaaagtcctagtgttccgctacatgttctggtttgtgttg
gccgtcgtgtttgtgacaggctccacgcggatcagcgtgttcggtctgggctatctcctg
gcctgctttttcttcctgctgtacggtaggcgtctgatgatcaaaccctcgcgtacacgc
ctgctcatgtgggactgcctcatcatctacaatgtaggagtcatcatcgctaagaatgtg
ctgtctatcctggcctgtgtgtttgtggctgagatgcaggcacgtttctgctgggtgatc
aatctcttcagtctcgtctgtacagtcaaaggctactatgaccccacatccctgagtgat
aaggagtgcactttgccaatagaggaggcaggcatcatctgggacagcatctgcttcttc
ttcctcctgctgcagaggagagtcttcctcagcttctactttgtgcacgtgactgcagat
cttcaggcgtcagcacaacaggcatcacggggtttcgagctgttcaatgccagcattata
aagaatgtgcgtttttatcagcagaacgagaaaaaatccattcagcagctgaagagctcg
atgaagcgaatccgtgacaagcagcagcgctacaaagagggacggaaactatctgaaaga
gagcagcagccatcagagtctcaggaagagaggaaggagaagaagaagaataaaaaagag
tggtaccgtccctggatagatcatgcaactgtcttgcattctggggattactacctgttt
gaatcagacagtgaggatgaggatctgtttgaagaagagcagaaacatcacaaacagact
gcatttcagatggcataccaggcatgggtgagcagtgctaaacaggtactaaaagaccgg
caaaagagacagaaagaacagagacgggagagagagagaaatctgcttgcctcacagggc
tcaggtgatgctgaggagtcagagcatgtttttgaggagaaaacatctccggaggaagag
aaggaggcaggggaagaagaagaagaggagtcaggttctggccgcgatacagtgcagcgg
atcctggacgtgctgaagttcctctgggtgctgtgcttggccatggtggacagcttcaca
ctatggctcaacctgctcaccaagcagtacgtggacacatcaactgtcctgtgtgaggaa
cgctacctgctcatccacaacgtcaaccaggggcctgcaagcgagcccacagatgaccag
ctgtctgaggacagtgaaagcctcactttggacacgtgtctagatgagaccgatacggat
cttcttaacatcagccatactgctagtgctgatgagctggatgacatcattgagtctgag
gatccacgagcccacagcagcatgacactgtgctcccagcccactatagagctggagtta
gaaatacaccatcggaaatccagaacagccagcgaactgctctcagacaggcactacgct
attgaggagctggtgcagagtcgggagttttacgcctcccagaaccggctgcttaagctc
atctttgcgctgtgtaacgtcgtggctggccactcggagctcgtgtgctacttcatcatt
gtgctgaacaacgtggtcacggcctccgtcatatcactggtgctgcccatcctaatcttc
ctgtgggctatgctgtcagtgccgcggacctctaagaggttctggatgactgccatagtt
tacacagaggtcatggtggtggtcaaatacctgttccagtttggctttttcccctggaac
agtgaatacgagttgaaactaaacgagaacaagccctactttcttccacggatcctcggc
ctggataaaaccgacaactacatccgctatgacctgctacagcttctggcccttttcttc
caccgctctctgctccagcgttacgggctgtgggaccgggaggggcctctggaggagaag
agtacagaggagaagaagaagaagaagaaagttgaagagatgatagaggacaaaactgct
gagcctgatgaggccgagtcaccaacagacataacgacagagacccagactgagcctgag
gagaatccaaatgcagaaataacacctgaacccgaagagcccaagaaaaaagggggattt
ctgcgcctccgcaaaaagaaatcctcagacaaagatgccacagcaaaagaaaccaagaag
aagaagaaggccaagggccagcgcagaaaggaagccagtaaaaagctaaaggattttgga
gaaaaactcaaaggctttttcatctctgtagtgatgaatacttataaaccagcaaagacg
ttcatccagaacatcctgcatactgagtaccgagctgccactgatgtctacgctctgatg
ttcctcactgatgtggtggacttcatcgtcatcgtgtttggcttctgggcttttggaaaa
cattcggccgctgcagacatcgccacctcactttcagatgaccaggtccccgaagcgttc
ctcgtcatgctcctcatccagttcagcaccatggtgatcgaccgcgctctctacctgcgc
aaggccctgctcggaaaactcatcttccaggtcatcctagtactgggcatccacatctgg
atgttcttcatcctgcctgcagtcactgagaggatgttcagccagaactttgtggcccag
ctctggtacattgtcaagtgcatctacttcactctgtctgcatatcagattcgctgtggc
taccccactcgcatccttggaaacttcctcactaagaagtacaaccacctcaacctcttc
ctcttccaagggttccgcttggttccatttctggtggagcttcgggctgtaatggactgg
gtctggaccgacactactctctctctctctaactggatgtgtgtggaggacatttacgcc
aacatcttcatcataaagtgcagtcgagagactgagaagaaatatcctcaaccgaagggc
cagaaaaagaagaagatagtgaagtatggaatgggtgggctcatcatctttttcctcatc
tgcatcatttggttccccctactcttcatctccttggtcagatcagttgtgggtgtggtc
aatcatcccgtggatgtaactgtgaccgtcaagttgggaggctatgagcccctgtttacc
atgagtgtgcagcagcagtccatacagcctttcactgaaaaggattatgaccgcctcaca
gagcagtttggaaataacgcagtggccatgcagttcataacgctgtacagctacgaagac
atcgtaacagccaacattgatggcagttcaggctcagtgtggagaatcagccctcccagc
cgacaggaagttattaaggagctgctgaacagcccggcagacatgacactgcggctggcc
tggaacttccagagggacttggggaagggtggaacagtggaaaacacatatgacaagtac
gccattagtttggaacctggagatcctgtgagagccaacctagcctccctgctgctggga
aatcgcactgagccagttcgagtaccacacatgttccccaactacattagagccccaaac
ggagctgaagccaagcccgtcagccagctctatgatggagaagaggagggctatcaggac
gtgacgctctctctaatgagggatggctctctgaacggcaccggagctcaggagtggtgg
gacatcagcattgcagactgtgatgtgtctgcaggggcctgtggagttttacccatggtc
atctttaatgacaaagtgagcccgcccagtctgggcttcctggctggatacgggatcatg
ggactgtacgtgtctgtggtgctggtaatcggtaagttcgtgcgtggtttcttcagcgag
atctctcactccatcatgttcgaggagctgccgtgcgtcgaccgcatcctcaaactgtgc
acggacatcttcctggtgcgcgagacaggcgaactggagctagaggaagagctctactcc
aaactaatcttcctctaccgatcgccagagacgatgatcaaatggaccagggagaaggac
gacaactag
DBGET
integrated database retrieval system
