Ictalurus punctatus (channel catfish): 108259230
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Entry
108259230 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase RNF166 isoform X3
KO
K17044
E3 ubiquitin-protein ligase RNF166 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108259230
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108259230
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108259230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
zf_C2HC_14
UIM
DUF7577
UIM_2
DZR_2
Zn_ribbon_3
CEP104_ZnF
zf-BED
Nairovirus_NSm
Zn_Ribbon_1
Transket_pyr
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108259230
NCBI-ProteinID:
XP_017313990
UniProt:
A0A2D0Q9D6
LinkDB
All DBs
Position
27:complement(6800884..6835861)
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AA seq
182 aa
AA seq
DB search
MPFDPKKVDKSSSVEKQLSSYKAPCRGCSKKITLVKMRSHISSCTKVQEQMANCPKFMPV
VPTSQPIPSPTSVVKHHSRVKSSASVSNIPNRSTFVCPYCGARNLDQQELVKHCMENHRN
DPNKVVCPVCSAMPWGDPSYKSSNFLQHLLHRHKFSYDTFVDYSIDEEAALQAALALSLS
EN
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcgaccccaagaaagtggacaaatcttccagtgtggagaagcagctttcctct
tataaagcaccatgccgagggtgcagcaaaaaaatcacgctggtcaaaatgaggtcacac
atctcatcttgcacaaaggtgcaggaacagatggccaactgcccaaagttcatgcctgtg
gttcccacatcacagccgattcccagtcccaccagtgttgttaaacatcacagccgagtg
aagagcagtgccagtgtcagcaatattccaaaccgatcgacatttgtgtgcccgtattgt
ggggcgcgaaacctcgaccaacaagagctggtgaagcactgtatggaaaaccaccgcaac
gaccccaacaaagtggtgtgtcccgtgtgttcagccatgccctggggtgaccccagctac
aagagctccaacttcctgcagcacctcctgcaccggcacaagttttcctatgacacattt
gtggactacagcattgacgaggaggctgcactgcaggcagcactggccctctctctgtcc
gagaactga
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