Ictalurus punctatus (channel catfish): 108259238
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Entry
108259238 CDS
T04658
Symbol
ccnt2b
Name
(RefSeq) cyclin-T2b
KO
K15188
cyclin T
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108259238 (ccnt2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108259238 (ccnt2b)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
108259238 (ccnt2b)
Brd4/P-TEFb complex
108259238 (ccnt2b)
7SK RNP complex
108259238 (ccnt2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
TFIIB
Motif
Other DBs
NCBI-GeneID:
108259238
NCBI-ProteinID:
XP_017314007
Ensembl:
ENSIPUG00000013854
UniProt:
A0A2D0Q6S7
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All DBs
Position
27:1484129..1494942
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AA seq
558 aa
AA seq
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MATVLRGSTKWLFTREQIENTPSRRCGIEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMLNSFTKFHRNSIFPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQEPPLDT
NSNTYLQQAQELVLLETIVLQTLGFEITVDHPHTDVVRCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYRPTVVACVCIHLACKWSNWEIPISSDGKHWWEYLDPTVTLQLLDQLTHEF
LQILEKTPSRLKRIRNWRATQAAKRSKTESQSVGGSFQVPGHENLLVDSKADLMESMYPD
VSSALFPLDTLNGLANPSSSYVQADAHSSLQGVPIGSKPQQTATNKLSLEKYREKQAAEL
LQRRKHGHLLPETAALASSSSSSLSAVLMSSASSSSSLARVKYGQSGQEREMKSGSLKRR
HPSSSSSSTENGAASQEELKMKIKMSESGGKSRHSPRSGREKHRASKHDAAHSHAHSHTT
AHAHGSHHKAHRSSKSHAGSAPLPPAPGHTQLGKMDRRPGEGPSAESTAPLLLNGQHMDY
ADTFNMLDSLLNAHNMNY
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgctgcgaggctccacgaaatggctcttcacccgggaacaaatcgaaaat
acgccgtctcgccgctgcggaatcgagccagaccgggaattatcttaccgacaacaagct
gccaacctgatccaggacatgggccagcggcttaacgtctcccagctcacaatcaacact
gccatcgtctatatgcaccgattttatatgctaaactccttcacaaagttccaccgaaat
agcatctttcccaccactctatttttagctgctaaagtggaagagcaaccccggaaactt
gaacacgtcattaaagtggcacacgcctgtcttaatccgcaagaacctccactggacacc
aatagcaatacgtacctccaacaagcacaagagctggtgcttctagaaaccatagtgctg
caaacactgggctttgagattactgtagatcatccacacacagatgtggtgagatgttcc
cagctagtgcgagcgagcaaggacttggcccagacctcctatttcatggctaccaacagt
ctgcacctgaccacgttctgcctgcagtacagacccacggtggtggcgtgcgtgtgcatc
cacctggcctgcaaatggtctaactgggagattcccatctcgtcggacggtaaacactgg
tgggagtatttggaccccacagtcaccctgcagcttctagaccagttaacgcacgagttt
ctacagattttggagaagacacccagcaggttgaaaaggatcagaaactggcgggccact
caagctgctaaaaggtccaaaacagagagccagtcggtggggggctcctttcaggttcct
ggccacgagaacctgctggttgacagtaaggctgatttgatggagagcatgtacccggat
gtgtcctccgctttgttcccgttagacaccctcaacggcctcgccaacccgagctcctcg
tacgtccaggccgacgcccactcgagcttacagggagtaccgatcggcagcaagccgcaa
caaacagccaccaataaactgagtctggagaagtacagggagaaacaagcggccgagctg
ctgcagcgccgcaaacacggccacctgctgcccgaaaccgcggctctggcgtcgtcgtcc
tcgtcgtctttatcggcggtgctgatgtcctcagcgtcatcatcttcctcgttggcacgg
gttaaatatggtcagtccggacaggaacgggagatgaagagtggctcactgaaacggcgt
cacccttcatcctcctcttcctccacggaaaacggcgcagcgagtcaggaggagctaaag
atgaagatcaaaatgtccgagagcggcggtaagagcagacacagccctcgctcgggtcgg
gagaaacaccgagcttcgaaacacgacgccgcgcactcgcacgcacactctcacacaact
gctcacgcgcacggcagccaccacaaagctcaccgctcctctaagagccatgccggctct
gcccccctgcccccagcgcccggccacacccagctggggaagatggacaggaggccgggg
gaggggccgagtgccgagagtacagctcctctgttactcaacggccagcacatggactac
gcagacacgttcaacatgctcgactcgctgctcaacgcacacaacatgaactactaa
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