Ictalurus punctatus (channel catfish): 108259262
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Entry
108259262 CDS
T04658
Symbol
nfatc3a
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 3 isoform X1
KO
K17333
nuclear factor of activated T-cells, cytoplasmic 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
ipu04148
Efferocytosis
ipu04218
Cellular senescence
ipu04310
Wnt signaling pathway
ipu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108259262 (nfatc3a)
04310 Wnt signaling pathway
108259262 (nfatc3a)
04020 Calcium signaling pathway
108259262 (nfatc3a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108259262 (nfatc3a)
09143 Cell growth and death
04218 Cellular senescence
108259262 (nfatc3a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
108259262 (nfatc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259262 (nfatc3a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
108259262 (nfatc3a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
108259262
NCBI-ProteinID:
XP_017314052
Ensembl:
ENSIPUG00000017379
UniProt:
W5UJC5
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All DBs
Position
27:complement(13975408..14058794)
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AA seq
1051 aa
AA seq
DB search
MSSADCSGNEELDFRLIFGEDGQQPPSGPADLEPDDTTSFYILNVGQPPAVANQNLGVQR
HGVQPHSQLISTSPTLQPLHKPFEPSYESLDSKYPPSGGGGGAGRPPKAFECPSIQITSI
SPSCQQELDGNEDDLRSKGVDRDFHEQPLSRDHLYLPLDHSYRDSSLSPSPCSSLSSRSW
FSDASSCESMSHVYDDVDSELNEAAARFTLGSPLSSPQGAPLEEPWQQQHHHHHHPGYAP
ALSHPHTHSLSPRQSPCHSPRTSVTDENWLSPRPPSRPSSRPTSPCGKRRHSSADICFSG
SPHHSPTPTPGPSPRGSVTEDTWIGSPVRIAPFQCCTSDPDIPSKTRKTSQDCTATLQSG
KNDLSRDDSGNISPLRDSPADESMHGLKKDGAGEQFLSVPSHFTWNKPKPGHTPIFRTSS
LPPLDWPLPSQYSQYELKIEVHPKAHHRAHYETEGSRGAIKAASGGHPVVKLVGYNEKPV
NLQMFIGTADDRYLRPHAFYQVHRITGKTVATASQEIIITSTKVLEIPLLPENNMSASID
CAGILKLRNSDIELRKGETDIGRKNTRVRVVFRVHIPQPNGKVLSLQAASIPVECSQRSA
QELPQVEKFSLSSCPVSGGEEMVITGSNFFPESKVIFLEKGPDGRPQWEVEAKIIREKSQ
GSSIVVEVPPYHSKSITSAAQVQFYVCNGKRKRSQSQRFTYLSVLVKQEHRDDLDPPAMP
PMPMPHAHAVGLVHSPVLPSPDHAHSQDGLLQGPPHGLAPSLHPLQTTCAPLHSPTFSHL
PHLQARGLHPPPECQMPFHPGSMPPSRPTYSPLQHNLPFNGQASLPGASSQAYERVPFQP
EQAGCHSLGMGMVYGSPVSAPVSGTGPSSPSHSSPQLHSLGYHCATPAQVTSPTHSLVQP
GMQLQRSLGYHPAGQRSASCPTPSSAPARMVPLPHSGPSSPQLHSLPYQSPTSSSPASSP
LGAQLSPQASSPVMTGIPTAGPMVHPLAPQQGPFTSEGERLNIKQEPEDRELTFRSIGLQ
DITLDDVNEIIGRDMSQAPGAHGSSSTLGHS
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgcagactgcagcgggaatgaggagctggacttcaggctgatcttcggtgag
gacggccagcagccgccttcaggccccgcagatctggagccggatgacaccacatcattc
tacatcctgaacgtgggtcagcctccagcagtggcgaaccagaacctaggtgtccagagg
catggagtccagcctcactcacagctcatctctacttctcctacgttgcagcctctccac
aagccctttgagcccagctatgagtccctggactctaaataccctcccagtggaggtgga
ggaggtgcaggtaggccccccaaggcctttgagtgccctagtatccagatcacctccatc
tccccaagctgccagcaagagctagatgggaatgaggatgaccttaggtccaaaggtgtg
gatagggacttccacgagcaaccgctgtctcgggaccacctgtatttgccactggatcac
tcgtaccgtgattcatcactgagcccgagcccctgcagcagcttgtcgtcacgcagctgg
ttctcagacgcttcatcatgcgagtccatgtctcatgtgtacgacgacgtggattcggag
ctgaacgaagcagcggcgcgtttcacactcggatctcccctctcctcaccgcagggtgcc
ccgctggaggagccatggcaacaacagcaccatcaccaccaccatccgggttacgcccca
gcactctcccacccacacacccactctctctctccacgtcagtcaccatgccactcacca
cgcaccagcgttactgacgagaactggctcagcccacggccaccttcacgcccatcctca
cgtcccacatcgccttgtggtaaaaggcgccactctagtgctgatatctgcttttcgggt
tcaccccatcactccccgacaccgaccccgggcccctcgcccaggggcagcgtcactgaa
gacacctggatcggcagtcctgtacgtatagcacccttccagtgctgcacctcagaccct
gacatcccttccaagaccaggaagacatcacaggactgtacagcgacgctacagtccggg
aagaacgatctcagccgggacgattcgggaaatatctcaccgcttcgggattccccggct
gacgaatccatgcacggactgaaaaaagacggagctggggagcaattcctttccgtgccc
tctcatttcacctggaacaaacccaaaccaggacacacacctattttcaggacttcctct
ctgccccccctggactggcccttgccgagtcagtacagtcagtatgaactgaagatcgag
gtgcatcctaaagcccaccaccgggcgcactacgagaccgagggcagccgaggagccatc
aaagcagcctccggcggacaccctgtcgtcaagctcgttggctacaacgagaagcctgta
aatctgcagatgttcatcgggacggcagacgaccgctatttaagaccgcacgctttctac
caggttcaccgcatcacaggcaaaacagtggccacagcgagccaggaaatcatcatcact
agcaccaaagttctggagattccactccttcctgagaacaacatgtctgccagtatcgac
tgtgccgggattctaaagctgaggaactcggatatcgagctgaggaaaggcgagacagac
attgggcggaaaaatacccgagtgcgtgtggtgtttcgggttcatatcccacaacccaac
ggaaaagttctgtccttacaagctgcctctatccctgtggagtgctcccagcgctcagca
caggagttaccacaggtggagaagttcagtttgagcagttgtccagtcagtggaggagag
gaaatggtcatcacaggttcaaacttcttccctgagtcaaaggtcatctttctggagaaa
ggccctgatggacgaccacagtgggaggtcgaagccaagatcattcgtgagaagagtcaa
gggtcgagcattgtagtggaagttccaccgtaccacagcaagagcatcacctccgcagct
caggtgcagttctacgtgtgcaatgggaagcggaaaaggagccaatcacaacgattcacc
tacctgtcagttctggttaaacaggagcaccgagatgatttggacccccctgccatgcct
ccaatgcccatgccccatgcacatgccgttggcctggttcattctccagtcctgccctcc
ccggaccacgcacattcacaggatgggcttctgcaaggccccccacatggcctggcaccc
tccctgcaccctctccagacaacctgcgctcctcttcactcacctaccttctctcacctg
cctcacctccaggcccgaggtcttcacccacctcccgaatgccagatgcccttccatcca
ggcagtatgcccccctcgagaccgacctactccccactccagcacaatctacccttcaac
ggccaagccagtctacctggagccagctctcaggcctacgagcgcgtgcccttccagccc
gagcaagctgggtgccactctttgggaatgggcatggtgtatggctcaccagtttcagct
cctgtctctggaaccggaccctcaagcccgagccactcttctcctcaactccactctctg
ggctatcactgtgccaccccagctcaggtgacctcgcccactcactccctcgttcaacct
ggaatgcagctccagcgctcgctcggctaccatccggccgggcaacgttcggcctcgtgc
ccgacgccctccagcgcccctgcccgaatggtacccctgccccactcgggtccatcctct
cctcagctgcactcactgccctaccagtcacccacctcgtcctctcctgccagcagccct
ctcggtgcccagctctcaccccaggccagcagtcccgtcatgacagggattcccactgca
ggacccatggtgcatccgctggcaccacagcaaggcccatttaccagcgaaggagagagg
ctgaacatcaagcaagaacccgaggacagagagctcacattccgctctataggcctgcag
gatattacactggatgatgtgaacgagatcatcggcagagacatgtctcaggctccgggg
gcgcatggatcctcaagcacactcggtcactcgtag
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