Ictalurus punctatus (channel catfish): 108259306
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Entry
108259306 CDS
T04658
Name
(RefSeq) CUGBP Elav-like family member 1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108259306
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108259306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
Motif
Other DBs
NCBI-GeneID:
108259306
NCBI-ProteinID:
XP_017314159
Ensembl:
ENSIPUG00000023708
UniProt:
A0A2D0Q8X4
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All DBs
Position
27:6437257..6478032
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AA seq
501 aa
AA seq
DB search
MNGTLDHPDQPDIDAIKMFVGQIPRSWSEEQLRELFEPYGAVYEINVLRDRSQNPPQSKG
CCFITYYTRKSALEAQNALHNMKILPGMHHPIQMKPADSEKNNLVEDRKLFIGMISKKCN
ENDIRLMFSPYGQIEECRILRGPDGLSRGCAFITFTARQMAQSAIKSMHQSQTMEGCSSP
IVVKFADTQKDKEQKRMTQQLQQQMQQLNAASMWGNLTGLNSLGPQYLALYLQLLQQSAS
SGSALNNLHPMSGLNAMQNLAALAAAASATQATPSGSSALTTSSSPLSALTSSGTATGQQ
TLSAWDGCKAGSSPTSSTNTSVNTMASLGALQSLAAGAGAGLNMSSLAGMAALNGGLGSG
GLSNGSGSTMEALTQAAYSGIQQYAAAALPSLYNQSLLSQQSISAAGSQKEGPEGANLFI
YHLPQEFGDQDLLQMFMPFGSVISAKVFIDKQTNLSKCFGFVSYDNPVSSQAAIQSMNGF
QIGMKRLKVQLKRSKNDSKPY
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggacactagaccatccagaccagcctgacattgatgctataaaaatgtttgtg
ggtcaaatccctcgttcctggtcagaagagcagctgagggagctctttgagccctacggt
gccgtctatgaaatcaacgtcctcagagacaggagtcagaaccccccccagagcaaaggt
tgttgtttcatcacatattacacacgcaaatcagcattagaagcacaaaatgcccttcac
aatatgaaaattcttccagggatgcatcatcccattcagatgaagccagcagacagcgag
aagaacaacttggtagaagaccgaaagctgtttattgggatgatctccaagaaatgcaac
gaaaacgacattcggctcatgttctccccctacggtcagattgaggagtgtcgcattctc
agaggacctgatggactgagccgtggttgtgccttcatcacattcacagccagacagatg
gcacagtctgccataaaatccatgcaccagtcacagaccatggagggctgttcatcccca
atcgtggtgaagtttgcagacacacagaaggataaggaacagaagcgcatgacccagcag
ctgcaacagcagatgcagcagctcaatgctgcctccatgtggggaaatttaactggcctt
aactcgctaggcccacagtacctcgcactttatttgcagctcctgcagcaatccgcatcc
tcggggagtgctctcaacaatctccaccccatgtcaggtctgaatgccatgcagaatctg
gctgcattggcagcagcggcgagtgccactcaggcaactccaagcggcagcagtgcactg
accacgtccagctcaccactcagtgcgcttactagctcaggtacggccaccggacaacag
actctctctgcctgggatggctgcaaggccggttcctctcccacctcgagtactaatacg
tctgtgaataccatggcttctctgggtgcgctgcagtctctggctgcaggtgctggtgct
ggcctcaacatgagttcactagcaggtatggctgcattgaatggtggcttgggcagtgga
ggcctttctaatggctccggcagcactatggaggcattgacacaggcagcttactcggga
atccagcagtatgcagctgccgccctacccagtctttataaccagagcctactttctcag
cagagcatcagtgctgctggcagccagaaagaaggtccagagggtgcaaatctcttcatt
tatcacctgccacaggagtttggtgaccaggacttgcttcagatgttcatgccttttggc
agtgttatctctgccaaggttttcatagacaaacagactaacctcagcaaatgttttggc
tttgtgagttacgacaatcccgtttcgtcccaggcggccattcagtcaatgaacggtttt
cagatcggaatgaaacgactgaaggttcaactgaaacgatccaaaaatgacagcaagcca
tattga
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integrated database retrieval system
