Ictalurus punctatus (channel catfish): 108259326
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Entry
108259326 CDS
T04658
Name
(RefSeq) 26S proteasome regulatory subunit 6A
KO
K03065
26S proteasome regulatory subunit T5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
108259326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ipu03051
]
108259326
Proteasome [BR:
ipu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
108259326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
RuvB_N
AAA_16
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
AAA_33
PhoH
IstB_IS21
AAA_7
AAA_24
CCDC22_CC
AAA_28
ATPase
NPHP3_N
Sigma54_activat
Golgin_A5
AAA_14
RNA_helicase
Parvo_NS1
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
108259326
NCBI-ProteinID:
XP_017314201
Ensembl:
ENSIPUG00000002665
UniProt:
W5UJR5
LinkDB
All DBs
Position
27:5502410..5514921
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AA seq
427 aa
AA seq
DB search
MASLNDRSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttgaatgacagatcagtttgggatgaagtggaggatgggattggtgaggag
gttttaaagatgtctactgaggaaatagttcagcgaaccagattgctggacagtgaaata
aaaataatgaagagtgaggtgctgcgagtcactcatgagctacaggccatgaaagacaaa
atcaaagagaacacagagaagattaaagtgaacaaaactctgccgtatctcgtgtctaat
gtcatagagctgctggatgtggaccccaacgatcaggaggaggatggtgccaacattgat
ttggactcgcagagaaaggggaagtgtgcagtcatcaaaacatccacacgacagacatat
ttcctgcctgtaattggcttggttgatgctgagaaactgaaacctggggatcttgtgggt
gttaataaggactcatatctgattctggagactctgcccactgagtatgactccagagtg
aaggccatggaggtggatgagaggcccactgagcagtacagtgacattggaggcctcgac
aagcagatccaagagttggtggaagcgatcgtcttacccatgaaccataaggaaaagttt
gagaatttgggtatccagccaccaaaaggtgttctgatgtatggacctccaggaactggc
aaaacccttctggccagagcttgtgctgcgcaaaccaaagcgacattcctaaagctagca
ggccctcagttggtgcagatgtttataggagatggggcgaagctggtacgtgatgcattt
gctctggctaaagaaaaagccccttcaatcatcttcatcgatgagctggatgccatcgga
accaagcgctttgacagtgagaaggctggagacagggaggtgcagaggaccatgttggag
ctgctaaaccaacttgatggatttcagcctaacatgcaagtcaaggtgattgctgctact
aacagagtggacattctggaccctgcgctgctgcgctcaggccgactggaccgtaagatt
gagtttcccatgcctaatgaagaggctcgtgctcgtataatgcagatccactcgcgcaag
atgaacgtcagtcctgatgtgaactatgaggagttggctcgctgcactgatgactttaat
ggtgctcagtgtaaagctgtctgtgtggaggcgggcatgattgctctgcgccgtggggcc
actgagctgaaccatgaagattacatggagggtattctggaggtgcaagccaagaaaaag
gccaacctgcagtactatgcttag
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