Ictalurus punctatus (channel catfish): 108259347
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Entry
108259347 CDS
T04658
Name
(RefSeq) cartilage intermediate layer protein 1 isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108259347
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
108259347
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
CarbopepD_reg_2
CarboxypepD_reg
ig
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
108259347
NCBI-ProteinID:
XP_017314237
Ensembl:
ENSIPUG00000015347
UniProt:
A0A2D0Q7G1
LinkDB
All DBs
Position
27:complement(16905111..16933605)
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AA seq
1169 aa
AA seq
DB search
MAYKRTWVCRLLLFGISITFAQGSGRSMQDNPAVFDTEGDYDWTTWFNIDHPGGKGDYEQ
LDAIRFYYRARVCESPRALEARTTDWIPARRTGERVHAEPAVGFWCINSEQPEGKSCSNY
AVRFLCPRDTKPETQGTWGQWSDWTPCPAQCGQVAAQVRSRTCTTQSRQCNGLKMESRQC
KGPICPGCSLQCAIGKANTDCSACMCEDHTVLGSVRRAGSLPAPGAAILLSGTSPKLLTL
SDHNGHFRVPRICPNGNTTLLIKLQGHRPQEIVMPLSSEPTTVLHVKLERAKNLYVQKNP
ESKARRKGQTAAFCCKVTGSPEPDEYQWFHNGTLLAKSVHHYDERLVLRNLSMAQAGEYY
CRATNENGAIKSKPATLSVIDQAEPSCNPNPESHMIRLPHDCFQNQSNSFYYDVGRCPIE
TCSGQLDNGIRCKDSISFCCGVSKMEERQITCQGYQLPTMVVTQCGCKKCVEIKTIVRGH
ALAADTGEPLRFGHIYMDGARISRTGYKGTFSIQVPTDTERLVLTFVDNMQKFVNTTKVL
LFNNKGGAVYHEIKLLRKKPPVTLSSIASNKLQLGEVQGEEPMAELEIPPNSFYKQNGEV
FVGNVKASVTFMDPRDVSTAAAAQSDLNFVGTEGDTLPLRTYGMFSVDFRDEADGESLNA
GKVKVRLDAAQVKMPEHLETMKLWSLNPETGLWEEEGQLRMEKTRRRKREERTFLVGNME
IRERRLFNLDVPENRRCYVKVRAFRSERYMSSEQVEGVVVTLINMEPTAGYSSNPRAWGR
FDSVITGPNGACLPAFCDDQRADAYSAYVMANLGGEELEAVASAPKLNPNIIGVPQPYLN
KLNYRRTDHDDLRIKKTAFSINIAKPSPNAAEEANGPIYPVEKLKECEEAPFNAPHFRFS
RVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPTEYRACFIKVKLNSPHELNVRSRNMGG
THPRTVGQLYGLRDTRSIRDRDQSSVSAVCLEFKCSGMLYDQDRVDRTLVKVIPQGSCKR
ESVNSMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRC
FDGTSDGTSRVMKSNEGVALIFTCGDKEVTRQSVFQQLQNAPGRAIMGTTRPGRGNRRQR
GDSSATLRNSQRRSTRNPNSRSPATRRSS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaagcgaacgtgggtctgtcgtcttctcctctttggaatttccatcaccttc
gctcaaggatcaggaagatccatgcaggacaatccagctgtgttcgataccgaaggtgac
tacgactggacgacttggttcaacatcgatcaccctggagggaagggagattatgagcag
ctggatgcgattcgattctattaccgagctcgtgtgtgtgaatccccacgggcactagaa
gctcgaactacggactggataccagctcgcagaaccggagagagagtgcacgccgaaccc
gctgtgggattctggtgcatcaattcggaacaacctgaagggaagagctgctctaattac
gcagtccgtttcctgtgcccaagagacaccaagccagaaactcaaggaacgtggggtcag
tggtcagactggaccccgtgtcccgcacaatgtggccaggtcgcggcccaggtccgatcc
agaacgtgcacaacccaatccaggcagtgtaacgggctaaagatggagagcagacagtgc
aaaggacccatatgtccaggttgtagtttgcagtgtgcgataggcaaggcaaacacagac
tgcagtgcttgcatgtgtgaggatcacacggtgcttgggtcagttcgtagagctggaagt
cttccagctcctggggcagcaatcctcctttcaggcacaagccccaaacttctcacgcta
tctgaccacaacggacacttccgtgtaccaaggatctgcccaaacggcaacactacactg
ctgatcaagctgcagggccacagacctcaggagattgttatgccgctgagctctgagcct
acaactgtacttcatgtgaagctggagcgagcaaaaaacctgtatgtgcaaaagaaccca
gagtcaaaggcgaggagaaagggtcagacagctgccttctgctgcaaggttactggttca
cctgaacctgatgagtaccagtggtttcacaacggaactctgcttgcgaagagcgtacat
cactatgacgagagactggttttgaggaacctgagcatggctcaggctggagagtactac
tgcagagccaccaatgagaacggtgccattaaatccaagccagccacactctcagtcata
gatcaagctgagccttcatgcaacccaaatcctgaatcccacatgatccgtctgcctcat
gattgcttccagaaccagtcgaactcattctactatgacgtaggaagatgccccatagaa
acatgcagcggccagctggacaacggtattcgatgcaaagactccatatctttctgctgt
ggggtgtccaaaatggaagagagacagataacatgccaaggctaccagttacctacgatg
gtggtcacccaatgtggctgcaaaaaatgtgtggaaataaagacaatagttcgtgggcat
gctcttgcagcagatacaggagagcccttaaggtttggacacatctatatggatggtgca
aggattagccgaacaggatacaagggcactttctccatccaagttcccacagatactgaa
cggctagttcttacttttgtagacaacatgcaaaagtttgtgaacactactaaagtgctt
ttgttcaacaacaaaggtggagctgtgtaccatgagatcaaactgctgaggaaaaagcct
cctgttaccttaagctcaatcgctagcaacaaactacagcttggagaagtacaaggtgag
gaacctatggccgagcttgaaattccaccaaactctttctacaagcagaatggagaggta
tttgtaggtaatgtgaaggccagcgttaccttcatggacccaagagatgtatccacagca
gcggccgctcaaagtgatctcaacttcgttggtaccgaaggtgatacgttgcccttgaga
acctatggcatgttctcagttgacttcagggatgaggcagacggggagtcactgaatgct
ggaaaagtaaaggtccgacttgacgcggcccaagtcaaaatgccggaacacctggagaca
atgaaactgtggtccctcaacccagagactggcctttgggaagaagaaggacagcttcgt
atggagaaaacacgacgacgaaagcgagaagaaaggactttcctcgtaggaaacatggaa
atacgagaaagacggctgtttaacttggacgtgcctgaaaacagaagatgctatgttaaa
gtcagagctttccgtagtgaacgatatatgtcgagtgagcaagtggagggtgttgtggta
actctgattaatatggagcctacagctggttactccagcaaccctcgtgcatggggtcgg
tttgatagcgtcatcactggtcccaatggtgcatgtctacctgccttctgtgatgaccaa
agagcagatgcttattcagcttacgtcatggcaaacctgggaggtgaagaactggaagca
gtagcttcagcgccgaaattaaatcccaacatcattggtgtccctcaaccctatttgaat
aagctgaactacagaagaacagatcacgacgatctcagaatcaagaagacggcgttcagt
atcaacatagcaaaacccagcccaaacgcagccgaagaagcaaacggtcccatttatcca
gtggaaaaactgaaggagtgtgaagaagctccatttaatgcacctcacttccgcttttca
agagtcgaaggagatcgctatgactacaacacggttcctttcaacgaggacgatccaatg
agttggacagaagactacttgagctggtggccaaagccgacggaatacagagcttgcttt
attaaagtaaaactcaacagcccacatgaactcaatgtccgttctcgcaacatgggaggt
acccatccaagaacagttggccaactctacggccttcgagacacccgcagtatcagagac
cgggaccagtccagtgtctcagcagtctgtttggagttcaaatgcagtggcatgctgtat
gaccaagacagagtggatcgcactctagtaaaggtgatcccgcagggtagttgcaagcga
gagagtgtcaacagcatgctacaagagtacttggtcaatcatcttccactagctgtcaac
aatgacaccaatgagttcaccatgcttgcaccactggaccctttgggccacaattatggc
atctacacagttaccgaccaagatcctcgcacagctaaggagatagcactcggacgctgt
tttgacggtacgtcggacgggacgtcacgagtaatgaagagcaatgaaggcgtggcatta
atcttcacttgcggcgacaaagaggtcaccagacagagcgtgttccagcagctccagaat
gctccaggccgggccataatggggactactcgtccaggtagaggcaaccggaggcagaga
ggagactcatcagccacactccgtaatagccagagaagaagtacccgcaatcccaacagt
cgctctccagcgacccgccgaagctcctaa
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