Ictalurus punctatus (channel catfish): 108259356
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Entry
108259356 CDS
T04658
Name
(RefSeq) COP9 signalosome complex subunit 1 isoform X2
KO
K12175
COP9 signalosome complex subunit 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108259356
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
108259356
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Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
GARP
TPR_11
DUF7014
TPR_1
Antitox_RHH
Motif
Other DBs
NCBI-GeneID:
108259356
NCBI-ProteinID:
XP_017314269
Ensembl:
ENSIPUG00000014781
UniProt:
A0A2D0Q7J4
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All DBs
Position
2:complement(35642608..35659377)
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AA seq
487 aa
AA seq
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MPLPVQVFNFQGSVEPMQIDADPQEDQQNAPDTNYVVENPTLDLEQYASSYSGLMRIERL
QFIADHCPQLRVEALKMALSFVQRTFNVDVYEEIHRKLTEATREMQGVPDAVPEGAVEPP
PLDTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKC
YSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQNQA
VLTKLKCAAGLAELASRKYKPAAKCFLQASFDHCDFPELLSPSNVAVYGGLCALATFDRQ
ELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRT
LYTQIRNRALIQYFSPYVSADMNKMALAFNTTVAALEDELTQLILEGLINARIDSHSKIL
YARDVDQRSTTFEKSLQMGKEFQRRTKAMILRAAVLRNQIHVKSPPREGSQGELTPANSQ
TRMSTNM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcccgtgcaggtctttaactttcaggggtcggtagagcccatgcagatcgat
gctgaccctcaggaagaccagcagaatgctcctgacaccaactacgtcgtggaaaatccc
accctggatctggagcagtacgcgtccagctacagcgggctgatgaggatcgagcggctg
cagttcatcgctgatcactgcccccagttacgcgtggaagctctgaagatggccttgtct
tttgtccaaagaacatttaatgtcgacgtttacgaagagatccatcgcaagctcactgaa
gccacaagggaaatgcagggagtgccagacgctgttcctgaaggagcagtggagcctcct
cccctcgacacagcctgggccgaatcgacccggaaaaaagccctgctcaaactggagaaa
ctcgacaccgacctaaagaactacaagggaaactccatcaaagaaagcatcaggagaggt
cacgatgatcttggagatcattacctggactgtggtgacctcagcaacgcgctgaagtgt
tattcccgagccagagactactgcacaagcgccaagcacgtcatcaacatgtgtcttaac
gtaatcaaggttagcgtttacctccaaaactggtctcatgtacttagctatgtcagcaag
gctgaatccactccagagatagcagagcaacgaggggagagagatagtcaaaaccaagct
gttctcaccaaactaaaatgtgctgcaggattggcagaactcgcctcgagaaaatataaa
cctgctgccaagtgcttcctgcaggcctctttcgaccactgcgacttccctgagcttctt
tcccctagtaacgtagcagtttacggaggactttgcgctttggctacgttcgacaggcag
gagctgcagcgtaacgtcatctctagcagctcctttaagttatttttagagttggaaccc
caagtgcgtgatattatcttcaagttttacgagtcaaagtacgcgtcctgtcttaagatg
ctggacgaaatgaaggataatctcctcctagacatgtatctggctccacatgtaagaaca
ctgtatacacagatcaggaacagagccctcatacagtacttcagtccgtacgtgtctgca
gatatgaataagatggcgttggcgtttaacaccacagtggcggcgctggaagatgaactc
actcagctgatcctggagggactgatcaacgctcgtatcgactctcacagcaagatcttg
tatgcacgtgatgtagatcagaggagcactacgttcgagaaatcgctgcagatggggaag
gagtttcagagacgaaccaaagccatgatcctgagagcagcagtactacgtaaccagatc
catgttaagtctcctccgagagaaggtagccaaggtgaactgacacccgccaacagccaa
acgcgaatgagcaccaacatgtga
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