Ictalurus punctatus (channel catfish): 108259373
Help
Entry
108259373 CDS
T04658
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04136
Autophagy - other
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108259373
04136 Autophagy - other
108259373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259373
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108259373
Membrane trafficking [BR:
ipu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
108259373
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108259373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR55
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
BCAS3_WD40
EIF3I
RMC1_N
Motif
Other DBs
NCBI-GeneID:
108259373
NCBI-ProteinID:
XP_017314296
Ensembl:
ENSIPUG00000014481
UniProt:
W5UIU8
LinkDB
All DBs
Position
2:35704669..35726838
Genome browser
AA seq
442 aa
AA seq
DB search
MESGDGGGGARGPALRCASFNQDSTSLAVGTKEGYRLFSVTAVDKLECIHESAENPDVYI
VERLFSSSLVVVVSHSIPRRMNVYHFKKGTEICNYSYSNSILAVRLNRQRLVVCLEESIF
IHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSATIGEIIVYDANNLNTVTVI
PAHDSQLAAITFNASGTKLASASERGTVIRVFSIPEGQRLFEFRRGMKRYVNISSLSFSP
DAQFLCASSNTETVHIFKLEQHGHRGEEENPSWSAYVGKMFSAASSYLPAQVSGMMSQDR
AFATVRLNTHGHKHTCTLTTIQKLPRLLVASSEGQLFVYNIDPQDGGECTLVHTHRLLGL
EEEAEVSEGSATPSYAATAAIGTGGPVSATLTGYSEDGGVMKGEVIPEHEFAAGPVCLDD
ETEFPPINRCLGGSRRGRTGRP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagagcggagatggaggcggaggagcccgcggcccggcactgcgctgcgcctccttt
aaccaggactccacgtcactggctgtgggaactaaggaaggttacagactgttctccgtc
accgccgtggataaactggagtgtattcacgaaagtgcagagaaccctgacgtctacatc
gtggaacgtttgttctccagcagcctggtggtggtggtgagtcactcgatcccgcggcgc
atgaacgtctatcacttcaagaaaggaacggaaatctgcaactacagctactctaactcc
atcctcgccgtgcgcctcaaccgacagaggctggtggtttgtctggaagagtctattttc
atccacaacataaaggacatgaagcttctgaagactctactgaacacaccatccaatccc
tcaggtctctgcgctctctccatcaaccattccaactcttacctggcgtatcccggcagc
gccaccatcggagaaatcatcgtttacgacgccaacaatctgaacacggtgactgtgatt
ccagctcatgacagtcaattagctgccatcaccttcaacgcctcaggcaccaaactggca
agcgcctcagagaggggcacggtgatccgagtgttctccattccagaaggacagagactg
ttcgaattccgcagaggaatgaaaagatacgtgaacatcagctctttgtccttcagtccc
gatgctcagttcctgtgtgcctcgagcaataccgagacggtccacatcttcaaactagag
cagcatggacaccgtggggaggaggagaacccctcgtggtcagcgtatgtggggaagatg
ttttcggcggcgagcagctacctgccagcgcaggtttcaggaatgatgagtcaggatcga
gcgttcgctacggtccgcctcaacacacacggccacaaacacacctgcactttaacaaca
atccagaagcttccgcggctcctcgtagcttcgtctgaagggcagctctttgtttataac
attgaccctcaggacgggggcgagtgcacgctggtgcacacacacaggctgttaggattg
gaagaggaggcagaggtgtctgagggatcggcgactccttcctatgctgccaccgcggcc
atcggcaccggcggtcccgtctctgccacactaaccggatattccgaagacggaggggtg
atgaagggcgaggtgattcccgagcacgagttcgccgccggtcccgtgtgtctggacgat
gagaccgagtttcctcccataaatcggtgtcttggcggatcccgtcgtggcagaaccggc
cgtccctga
DBGET
integrated database retrieval system
