Ictalurus punctatus (channel catfish): 108259379
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Entry
108259379 CDS
T04658
Name
(RefSeq) FH1/FH2 domain-containing protein 1 isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108259379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108259379
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
108259379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Drf_FH3
Motif
Other DBs
NCBI-GeneID:
108259379
NCBI-ProteinID:
XP_017314313
Ensembl:
ENSIPUG00000017731
UniProt:
A0A2D0Q6I6
LinkDB
All DBs
Position
27:13718358..13773340
Genome browser
AA seq
1422 aa
AA seq
DB search
MAIITCRVQYLEDTDPFVCTNFPEPRRPLQYDLNESVSLNLQIAGVQKLLQAPLKLEECA
LQVAPNGNYLDLESSLAEQKDELEQFYDDLAIGKKPILILRTQLSVRVHSILEKLYNSQG
PELRRSLFSLKQLFQDDKDLVPEFVNSDGLTCFIKVGAEADHNYQNYILRALSQIMLFVD
GMNGVINHNETVQWLYTLCGSLSRLVVKTALKLLIVFVEYVESNSPLFIQAVNTVDSKRG
VKAWSYLVAILEEKNGSDTELLVFTMSLINKTLAALPDQDSFYDMTDSLEQQGMEHIMEK
HINSKVIDPDLKQQFTIYENALKQEDGDVDESSPLTRKERRKATNSEQEGRRSRRSSAQN
LEDVPFSSSLPTSATSSLSPTTGQSCTTSPIPSSTPSSPFPSSPVTHDPLSTSSSESDSS
SHSSTPVVPAIIVNESPTNDVRGRTFIGQYLAHMGISRRRLKKAGSITQEPSTPLKSLSV
SPADSPPQKNQTAEKEQSHTEGRGRLNLQEADSVCVEDIVSKDRPILRKYAGQFLRRLEV
REWEKRNSKDVASLINITSPEPDICSHSTEGVQPTSEGTDQREVEELQSPGANSSNSSFP
LSTLEQPGEPQTAHRNEPAGGSVHQHSTISNDKKFMLDMLYSNSSTSSGSGPLKSPNVED
SSLVDRGISSLAGRLSSLQSRSSQPSEDTSRRAELEGLEGSAHAARTRLAEEQTKRLRPQ
HSIDAETHSRTLEKTMMTPLARNSKDAWEHLQPSSRELRIKDLDFSDLLEEEDIDVLDVD
AFDTGVINGVPPPPPPPPGLGSLPPPPPPPPPPGTGGSAPPPPPPAPPVAGGLGGPPPPP
PPPGMSSLSPSSIVDPEFVKKRKTVKLFWKELKQSESPRKCKFGRGTVWASLDKVTIDTN
KLEHLFESKAKELPVAKKGAEVKKPEILVLDPKRSNAINIGMTVLPAVHVIKSAILSFDE
FAINKEGIEKILTMIPTEEEKQRIQEAQLANPDVPLGTAEQFLLTLSSISGLTARLQLWA
FKLNYESLEKEIAEPLFDLKHGMEQLGKNQTFKRILATLLAMGNFLNGSNAKGFELSYLE
KVTEVKDTVHRQSLLHHCCNFVVEKFPDTTDVYSEISAITRSAKVDFEQLSDNLVQLERK
CKTSWDNLKVIAKHETKPHLKSKMTEFLKDCTERIIILKVVHRRIINRFHSFLLYLGQPS
YSVREIKITHFCKIISEFSLEYRTTRERVLTQKRKRAAHRERTKTRGKLITETEKFSGAV
PTVTQESPSPVSMTTEAEPAQEEHENMKNLLIANDDRCKLRRSRAVRKLVTARSDIPPAS
TNQDSNDEDEPVESLEMQELSDEGCGGVVPSPISTPKEDGAGSQDEATDEIMDRLVKSVT
QNPTERQSSPKTRKRSRLNRKSLRRTLKSGVSLEVVQALSLR
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggcgattataacgtgtagagttcagtatcttgaggacacggacccgttcgtgtgtact
aatttccccgagcctcggagacctcttcagtacgacttgaacgagtcggtgtcgctgaac
ttacaaatcgccggcgttcagaaactgctccaagctcctctgaagttagaagagtgtgcg
ctgcaggtggctcctaatggaaactacctggatctggagtcctcactggcagagcagaag
gatgaactggaacagttctacgatgatttggccattggcaaaaagcccattttgatcctc
cgaacccagctgtcagtgcgggtccactccatcctggagaaactgtataactcccagggg
cctgagctgcgtcgttcactcttctcgttaaagcagctgtttcaggatgataaggacctg
gttccagagtttgtgaattctgatggcttgacctgttttataaaagtgggcgcagaggca
gaccacaactaccagaactacattcttcgagctttaagccaaatcatgttgttcgtggac
gggatgaatggcgttataaaccataacgagacagtgcagtggctgtacaccctttgtggc
agcctgtctcggctggtagtgaagacggctctgaagctcctcatagtgtttgttgaatac
gtagagtcgaacagcccgctgtttattcaggctgtcaacacggtggatagcaaaagaggt
gtgaaggcctggtcatacctagtggctattttggaggagaagaatggctcagatacagag
ctcctggtcttcaccatgtcccttattaacaagactctagcagctctgcctgaccaggat
tcattctacgacatgacagacagcctggagcagcaggggatggagcacatcatggagaaa
cacataaatagcaaagtcatcgaccctgacctcaaacagcagtttactatatacgagaat
gctttgaagcaggaggatggagatgtagacgaatcatctcctcttacccgtaaggagcgg
aggaaagcaacaaacagtgagcaagagggccggaggagccggcggtcctcggcacagaat
ctcgaggatgttccgttctcttcgtctctgcctacttctgcgacctcatccttgagtccc
actacaggtcagagttgtaccacttctcccataccctcaagcactccatcctcccctttc
ccctcttctccagtcacgcatgatccattaagcacctcctccagtgaatcggactccagc
tcacacagctcaacccctgtagtgcccgctatcatagtaaatgaatctccaaccaatgat
gtcaggggacgcactttcattggtcagtacctggctcatatggggatttctaggcggagg
ttaaaaaaggcggggtccataacacaggagccctccactccccttaagagcctcagcgtg
tctcccgcagactcgcctcctcagaagaaccagacggcagaaaaagagcagagtcacact
gagggaagaggacggcttaacctgcaagaggcagactcagtttgtgtggaggatattgtg
agtaaggaccggcccattctcaggaagtatgcaggccaatttttacgccggctggaggtc
agggagtgggagaagaggaatagtaaagatgtggcgtctctgatcaacattacgtctcct
gagccagacatatgctctcactctactgaaggagtgcagccgacctcagaagggacggat
cagagggaagttgaggagctccagtctccaggggcaaactccagcaatagcagcttccct
ctgagcaccctggagcagccgggagaaccacaaacagcccatcgtaatgaaccagcaggg
ggcagtgtgcatcagcacagcaccatttccaacgacaagaagttcatgttggacatgctt
tattcaaactcttccacctccagtggctcaggaccactgaaaagccccaatgtggaggac
agcagtctggtagatcgcggtatctccagcctggccggtcgtctctccagtctgcaatct
cgctcctcacagcccagtgaggatacctccaggcgggcagagctggaggggcttgagggt
agtgcccatgctgctcgcaccaggctggcagaagagcagacgaaacggttgcgtccacag
cacagcatcgatgcagagacccactcacggactcttgagaagacaatgatgacgccactg
gccaggaacagcaaggatgcatgggaacatttgcaacccagctccagagaactgcgcatt
aaagacctggacttttctgacctgttggaagaggaggatattgacgtcttggacgtggat
gctttcgacacgggcgtgattaacggtgttcctccacctcctcctccacctccaggattg
ggatctctccctccaccacctcctccacctccacctcctgggactggaggatcagctccc
cctcctcctccaccagctcctccagttgctggaggtctgggtggaccccctcctccacca
cctcccccaggaatgtctagtctttctccatcttcgatcgtagatccagagtttgtcaag
aaacggaagacggtcaagctgttctggaaggagctcaagcagtcagagagcccgaggaag
tgcaagtttggtcggggaactgtctgggcatctctggataaggtcacgatagataccaac
aagttggaacatttgtttgagtcaaaggcaaaggagcttcctgtggcaaagaagggcgct
gaagtaaagaagcctgaaattcttgttcttgatccaaagagaagcaacgccatcaacatc
ggcatgaccgttttacctgctgtacacgttattaaatctgctatactcagcttcgatgaa
tttgccatcaacaaagagggtatcgagaaaatcctgaccatgatacctacagaggaggag
aaacagaggatccaggaggctcagctggccaatcctgacgttcctctgggtacagcggaa
cagtttctgctcactctgtcctccatcagtggcctcacagcacgcctgcagctctgggct
tttaaactcaactatgagagcttggagaaggagatcgctgagccccttttcgacttgaag
cacggtatggagcaactcggcaagaaccagaccttcaagcgtatcctagcaacactgttg
gctatgggtaattttctcaacggctccaacgcaaagggatttgagctgagttatctagag
aaagtgactgaggtgaaggatactgtacaccgacagtctctgctgcatcactgctgtaac
tttgtggttgagaaattcccggacacgacagacgtctattcggagatctctgccatcacc
cgatctgctaaagtggacttcgaacagctgtctgacaacctggttcagctggagaggaag
tgcaagacgtcctgggacaacctgaaggtaatcgccaagcacgagaccaaaccccatctg
aagagcaaaatgacggagttcctcaaagactgcacagagaggatcatcattcttaaagtg
gtgcacagacgcatcatcaacaggtttcactcgttcctcttgtacctgggtcagccttcg
tactcagtccgggaaattaagataactcatttctgtaagatcattagcgagttctctctg
gagtaccgcaccacgagagagagggtcctcacccagaaacgcaagcgtgcagcccaccgt
gagcgcaccaagacccgcggcaagctcatcactgagacggagaaattctctggagccgtc
ccgaccgttacccaagagagtccttccccggtctccatgacaacagaagccgagccagcc
caagaggaacacgagaacatgaagaaccttctaatcgccaatgacgaccgctgcaaactg
cgcagatcccgcgctgtacgaaagctggtgactgctcgctctgatattcctcctgcttca
accaatcaggattctaatgatgaagacgaacctgtagagagcttggaaatgcaggagtta
agtgatgaaggttgtggaggcgttgttccatcaccgatttctacacccaaagaagacggc
gcaggttcacaagatgaagcaacagatgagatcatggatcgtctggttaagtccgttact
cagaatcctaccgagagacagtctagtcctaaaacaaggaaacggtcacggctgaacagg
aaatcactgcggaggacgctgaagagcggtgtgagcttggaggtggtgcaggcactgagt
ctcagatga
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integrated database retrieval system
