Ictalurus punctatus (channel catfish): 108259417
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Entry
108259417 CDS
T04658
Symbol
trhra
Name
(RefSeq) thyrotropin-releasing hormone receptor
KO
K04282
thyrotropin-releasing hormone receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04020
Calcium signaling pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108259417 (trhra)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108259417 (trhra)
04081 Hormone signaling
108259417 (trhra)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108259417 (trhra)
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
108259417 (trhra)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srw
7tm_4
Motif
Other DBs
NCBI-GeneID:
108259417
NCBI-ProteinID:
XP_017314457
Ensembl:
ENSIPUG00000019908
UniProt:
W5U6C7
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Position
1:complement(24061954..24067607)
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AA seq
402 aa
AA seq
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MENVTLFGNANQTLSIWTDQSIEYKVVSVLLVIIICGAGIVGNVMVILVVLTTKHMRTPT
NCYLVSLAVADLIVLTAAGLPNITESLFGEWVYGYGGCLSITYLQYLGINASSCSITAFT
VERYIAICHPIKAQFLCTLSRAKKIIVMVWAFTTLYCVMWFYLSDIEKMIYNNITLSVCS
YKVARRYYKPIYFADFTLFYVVPLLLASVLYGLIARILFLNPLPSDPKEKAQTWRKGSCA
ESKKHTKNSSFGSTAASRRQVTKMLAVVVILFAFLWMPYRTLVVVNSFLKLPYTDTWFLL
FCRLCIYLNSAINPVIYNAMSQKFRAAFRKLCNCRPQSSQKPATYSMALTYSVIKETSNG
QSPDHFPTEMEELPGPTNEFLPGRNKISYKESSMSDSTLTTA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtgacattatttggaaatgctaaccagactctaagcatatggaccgaccaa
agcatcgagtataaagtggtgagtgtgttgttggtgatcatcatttgcggcgccgggatc
gtggggaacgtgatggtgatcctggtggtgctcacgaccaaacacatgcggactcccact
aactgctacctggtgagtttggcggtcgcagacctcatcgtgctgacggcggcaggttta
cccaacatcacagaaagcctgttcggggagtgggtgtacggctacggcggctgcctctcc
ataacatacctacagtacctgggcatcaacgcgtcatcttgctccatcacagccttcacc
gtggagaggtacatcgccatctgccacccgatcaaggcgcagtttctctgcaccctctcc
agggcaaaaaagatcattgtcatggtttgggctttcaccactctttactgcgtcatgtgg
ttttatctgtccgacatcgaaaagatgatctacaacaacatcaccttaagcgtgtgctct
tacaaggtagcaagaagatactacaagccgatatacttcgctgatttcactttgttctac
gtggttccgctgctgctggcctccgtgctgtacgggctgatcgccaggatcctctttctc
aaccccctgccgtcggaccccaaggagaaggcgcaaacctggaggaaaggttcgtgcgca
gagagcaaaaagcacaccaagaactcttcctttggaagcacagcggcctcgcgaagacag
gtgacaaagatgctggctgtggtggtgattctcttcgcgtttctttggatgccctatcgt
acactggtcgtggtcaactcgttcctaaaacttccctacactgacacatggtttttgctc
ttctgtcgactctgcatctatctcaacagtgcaatcaatcctgtcatctacaatgctatg
tctcagaagttccgtgctgctttccgtaagctgtgtaactgcaggccgcagagctcacag
aagccggctacatacagcatggcactgacttacagtgtaatcaaggaaacctccaatggg
cagagtccagaccacttccccacagagatggaggagcttccagggcctacaaatgaattc
ctgcctggaagaaataagatttcatataaggaatcctcaatgtcagacagcacgttaact
acagcctag
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