Ictalurus punctatus (channel catfish): 108259425
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Entry
108259425 CDS
T04658
Symbol
glis2a
Name
(RefSeq) zinc finger protein GLIS2
KO
K09233
zinc finger protein GLIS2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259425 (glis2a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108259425 (glis2a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
108259425 (glis2a)
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
108259425 (glis2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_6
FOXP-CC
Zap1_zf1
Cpxcr1_C
zf-C2H2_jaz
zf-C2H2_16
zf-met
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
108259425
NCBI-ProteinID:
XP_053532505
Ensembl:
ENSIPUG00000011659
UniProt:
A0A9F7QT89
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Position
27:complement(2372125..2387013)
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AA seq
436 aa
AA seq
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MHAMLSLDEPLDLKVSSSSRDRTHRTSICAPLRFTRTRVPRPTRSSDTDIADSPTSSKPD
LSACSSSPPSPQHSSSSCGPLSPPQARDSETIGYLEGEASPPPRPPGFQFFLPIGAGGSL
LPPSSILTAQRRDRRSSPEPAEEQLACRWLRCHLLFECLQDLVDHVTESHVKPERSSGYC
CHWEGCARKGRGFNARYKMLIHIRTHTNEKPHQCPICSKSFSRLENLKIHTRSHTGEKPY
VCPYEGCGKRYSNSSDRFKHTRTHYEDRPYCCKMAGCPKRYTDPSSLRKHIKAHGHSVST
GAEPPITTTDPSTPPASARAHLVLPGAALALLHAFSGPLMALGHSPLDLSMSAGHTGVEA
VVRHNMAPGLGLGKTPLFDPLLLPSFGLEAKQRVLKQKGGDDENDHDNRAVEEGCNALSW
VFVPPGMMMLKQAVVS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccatgctctccttagacgagccgctggacctgaaggtctcctcctcgagccgg
gacagaacacacagaacgtccatctgcgccccgctccgattcacccgaacaagggtacca
cgcccgacacgcagctccgatacggatattgcagactctcccacatcctcgaagccagac
ctcagtgcgtgttcctcgtctcctccctctcctcaacactcctcttccagctgtggtccc
ctgtcgccccctcaggccagggattcagagactatcggttacctagaaggtgaggcttct
cctcctccacgtcctccaggtttccagtttttcctacctatcggggctgggggcagcctc
ctcccacccagctctatactgactgctcagcgccgggacagacggagttctcctgaacca
gcggaggaacagctcgcctgccgctggctacggtgccacctgctgttcgagtgcctgcag
gatctggtggatcatgtgaccgagtcccatgtaaagccagaaaggagctcaggctactgc
tgccactgggaggggtgtgcgcgcaagggccgcggcttcaacgccaggtacaagatgctg
atacatatccgcacacacaccaacgagaaaccccaccaatgtcccatctgcagcaagagc
ttttcccggctggagaacctcaaaatacacacccgctcgcacacaggagagaagccatac
gtgtgtccgtacgagggttgtggaaagcgctactccaactccagcgaccgttttaagcac
acgcgcacacactacgaggacagaccctactgctgcaagatggccggatgtcccaagcgg
tacacagatcccagttccctccgtaagcacatcaaggctcacggccactctgtctcaaca
ggcgccgagccacccatcacaaccacggatccttcgacccctcccgcttcagcaagagct
catctggtgttgcctggggctgcactggctctcttgcatgccttttctgggccactcatg
gctctgggtcactctccacttgatctctccatgtctgcagggcatacgggggtggaagct
gtggtccgtcataacatggctccagggctggggctgggcaaaacgcctctatttgaccct
ttactccttccttcgtttgggctggaggctaagcaaagggttttgaagcaaaagggtggt
gatgatgagaatgaccatgataatagggcggtagaagaaggatgcaacgctttgtcctgg
gtgttcgtcccgccgggtatgatgatgctcaagcaggccgtggtcagctag
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