Ictalurus punctatus (channel catfish): 108259475
Help
Entry
108259475 CDS
T04658
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04517
IgSF CAM signaling
ipu04530
Tight junction
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108259475 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108259475 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
108259475 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108259475 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108259475 (zgc:86896)
05100 Bacterial invasion of epithelial cells
108259475 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259475 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108259475 (zgc:86896)
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Arp2/3 complex
108259475 (zgc:86896)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108259475 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Rax2
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
108259475
NCBI-ProteinID:
XP_017314487
Ensembl:
ENSIPUG00000014606
UniProt:
A0A2D0Q861
LinkDB
All DBs
Position
2:35696249..35702730
Genome browser
AA seq
415 aa
AA seq
DB search
MQTRPLPPPPALAHSVFFPSPEPQCSAAFVSTAQSPRSRTTDLRTEYTDSEKELLCSNMS
LYSFGLEPLSCHAWNKDRTQIAISPNSSLVNIYQKKEKEWIKIHELKEHSGRITGIDWAP
DSNRIVTCASDRNAYVWTLKDGVWKPTLVLVRINRAATCVKWSPQENKFALGSGAKLISV
CYFEKENDWWLSKHIKKGICSTVLSLDWHPNNILLAAGSADLHCRIFSTYIKEIEDKPGP
TPWGAKMPFGEMLLEHKDCGGWVHSIAFSPSGDALVWVSHNSSISVADATQSKEVTQLTI
EHLPMLSVLYISETEIVAAGHDCCPHQFSYKGPGKLEFVRKLGIAKQSSKNSMSAMQHFR
NLDKKAKTDEEDNELNTLHQNSITQLCVVEGDKVKVEKFSSVSLDGAMVLWELKP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcagacacgccctcttcctcctcctcctgctctcgctcactcggtgttttttccctcc
ccagagcctcagtgttcggcagcattcgtgtcgactgcccagagtccacggagccgcaca
actgacctcaggactgaatataccgactcagagaaagaactcctctgttccaacatgtct
ctgtacagcttcgggttggagcctctgtcctgtcacgcctggaacaaagaccgaactcag
atcgccatcagccccaacagcagtctggtgaacatttaccagaagaaggagaaggagtgg
atcaaaatccacgagctgaaggagcacagcgggcgaatcacgggaatcgactgggccccg
gactcaaaccgcatcgtcacatgcgcctcagacagaaacgcctacgtgtggacgctgaag
gacggcgtgtggaagccgactctcgtcctcgttcgcatcaacagagccgccacgtgtgtc
aagtggtcacctcaggagaacaagttcgctcttggaagtggagccaaactcatctctgtg
tgttacttcgagaaagagaacgactggtggctcagtaagcacataaagaaagggatctgc
tcgaccgtgctcagtctggactggcatcccaacaacatcctgctggcagccggatcagcc
gatctccactgcaggattttctccacgtatatcaaggaaattgaggacaagcccggcccg
acaccatggggagccaagatgccgtttggtgaaatgcttctggagcataaagactgtggt
ggctgggtacacagcatcgcattctctccgtccggagacgcgctggtctgggtcagccac
aacagctccatcagcgtcgccgacgccacacagagcaaagaggttacacagctgactata
gaacatctccccatgctcagtgtgctgtacatcagcgagaccgagattgtggctgcgggt
catgactgttgtccccaccagttctcctacaaagggcctggcaaactggagttcgtgcga
aagctgggcatcgccaagcagtcatccaaaaacagcatgtcggccatgcagcacttccgc
aacctggacaaaaaggccaagaccgacgaggaagacaacgagctgaacactctacaccag
aacagcatcacccaactgtgtgtggtggagggagacaaggtcaaagtggaaaagttcagt
agtgtcagtctggatggagccatggtgctctgggaactcaagccttga
DBGET
integrated database retrieval system
