Ictalurus punctatus (channel catfish): 108259586
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Entry
108259586 CDS
T04658
Name
(RefSeq) Golgi SNAP receptor complex member 2
KO
K08496
golgi SNAP receptor complex member 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108259586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259586
Membrane trafficking [BR:
ipu04131
]
SNARE
SNAP-25[N] (Qb)
Bos1 / Membrin
108259586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
V-SNARE
Ran-binding
DUF1664
Motif
Other DBs
NCBI-GeneID:
108259586
NCBI-ProteinID:
XP_017314679
Ensembl:
ENSIPUG00000015403
UniProt:
W5UQU8
LinkDB
All DBs
Position
2:complement(35475013..35484505)
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AA seq
212 aa
AA seq
DB search
METLYHQTKHQIEEIQSYMGRLKTTERQSVHLVENELQARIEQVFTHLERLMILAGKEPP
NRRHNAKQRVEQLKYDVQHLQSALRNFQQGRYTREAQEKEREELMSRTFTTNDADTSIPI
DDTLQFNSSLHSAHRGMDDLLGSGSSILNGLRDQRSTLKGTHKKMLDVANMLGLSNTVMR
LIEKRASQDKFIMVGGMLITCVFMFLVVKYLS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctttaccaccagactaaacatcaaatcgaggagatccagtcctatatgggg
cgactgaagacgaccgagcggcagtcggtgcacctggtcgaaaacgaactgcaggccaga
atcgagcaggtcttcactcatctggaacgcctcatgatcctcgccgggaaagaacctccg
aaccgccgtcacaacgccaaacagcgtgtggagcagctgaagtatgacgtgcagcatctg
cagtcagccctgaggaacttccagcagggacgatacacacgcgaggctcaggagaaggaa
agggaggagctcatgagtcgcactttcaccaccaatgatgcagatacttccatccccata
gatgacactcttcagtttaattccagcctgcacagcgcacacagaggcatggacgacctt
ctcggctccggctcgagcatcctcaacggtctccgcgaccagagaagcacgcttaagggt
acccataagaagatgctggacgtggccaacatgttggggttgtccaacacggtgatgcgt
ctgatcgagaaacgagccagtcaggataagttcatcatggtgggcgggatgctgatcacc
tgcgtcttcatgttcctggtagtcaaatatctcagctga
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