Ictalurus punctatus (channel catfish): 108259621
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Entry
108259621 CDS
T04658
Symbol
scml2
Name
(RefSeq) sex comb on midleg-like protein 2 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108259621 (scml2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108259621 (scml2)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
108259621 (scml2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
108259621
NCBI-ProteinID:
XP_053532565
UniProt:
A0A9F7QTC7
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All DBs
Position
27:complement(1067994..1097813)
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AA seq
646 aa
AA seq
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MKVETYDPRNSTSVCIATVMGLMGARLRLRLDGSDSTNDFWRLVDSSDIQPIGTCEKSGD
MLQPPLGFRMNASSWPVFLLRTLSGAEIAPAPAFKKEPLKPSRNHFRVGMKLEAVDRKNP
CLICPATVGQVRGDEVFIMFDGWRGAFDYWCEYYSRDIFPIGWCHLTNHSLQPPGTSCAL
PKSPIPSLSPSRSWRRSMQSPYQLPHPLPPLPVRKGVRGRRPKSQTIAMLKAIQNGQTQT
QSSVHKSVEPEHLEPRLHKKRGPKPGSKRKPRALPPLSSPSLSSSVSDGRLSSLQMTKDS
GVLTTVCVYVNKHGECGPHLDRKLMLQLPDHFGPGPVNTVLQHAVQACVDCAYQPKTLFS
FLQSQSDGGEIIRVRSDGGIHYVKLPRASSASFVLRFLETLCHHLQSENLFSSQPFNPLT
ANTLNAYDRSKSVKEETSEALSIVRGSRRFTRDSSAYSTPTPTNPPRTDTHPSEAETLPS
ENSVSAEQHFSEEPMDTSSAPARPPTLRGTTEHRNPAGNSPHYAPQQPPLRRVTSNPSEL
ATTRMLRRVEGTLSASSTTGPDHHTAEREASNRSPSSWSIEEVMQFVRDADPQALAPHAE
LFRKHEIDGKALMLLRSDMIMKYMGLKLGPALKLCHHIEKLKQGKL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggagacgtacgaccctcggaactccacctccgtgtgtatcgccactgtgatg
gggctgatgggagcacgtctgcgcctgcggttggacggcagcgacagcaccaatgacttc
tggcgtctggtcgactcttcagacattcagccaatcggcacgtgtgagaagagtggagac
atgctgcagccgccgctaggtttccggatgaacgcctcatcctggcccgtgttcctgtta
agaacgttaagtggagcggagatagcaccagccccggcgtttaaaaaggagccgctcaag
ccgtcgcgaaaccacttcagagtgggcatgaagctggaagcagtagacaggaagaacccg
tgtctgatctgcccagcgaccgtcggacaggtgcgtggagacgaggttttcatcatgttc
gacggctggcgtggagccttcgactactggtgcgagtactactccagggacatcttcccc
atcggctggtgtcacctgaccaaccatagcctccagccacctgggaccagttgtgctctc
cctaagagcccgattccttcgctgtccccgtcccgatcgtggcgccgctccatgcaatcc
ccgtaccagcttccgcacccgctgcccccattgcccgtcaggaagggcgtgcggggccgc
cggcccaagagccagaccatcgccatgctaaaggccatacagaacggacagacgcaaacg
caaagcagcgtgcacaagagcgtcgagcctgaacacctggagcccaggctgcacaaaaag
agaggacccaaacctggcagcaagaggaaaccgagagcccttcctcctctgtccagtccg
tctctgtcctcgtctgtctcggatggccgactctccagtctccaaatgaccaaagactcc
ggagtgttgaccacagtgtgcgtgtacgtgaataagcacggcgagtgcggcccacatctg
gaccggaagctgatgctgcagctgccggatcatttcgggcccggcccggtgaacacagtg
ctgcagcacgccgtgcaagcatgtgtggactgcgcgtaccagcccaaaacgctcttcagc
ttcctgcagtcgcagtcagacggcggagagatcatccgagttcgctctgacggagggatc
cactatgtgaagttacctcgagcctccagcgcctcattcgtgctacgcttcctcgagacc
ctgtgccaccatttgcagtcggagaacctgttcagcagccagccgttcaatccactcacc
gctaacacactcaacgcctacgacaggagcaagtcagtgaaggaggagacgtcggaagca
ttgtctatagtgcgcggtagcagacgcttcaccagagactcctccgcctatagcacgccg
actcctacaaacccaccgaggacagacacacacccctcagaagcagaaactctcccctcg
gaaaacagtgtctctgctgagcagcatttctctgaggagcccatggacacgagttctgcg
ccagctcggcctcccacgctgcgcggtacaaccgagcatcgcaatccagccgggaacagc
ccgcactacgctccccagcaaccccctctgcgccgggtcacctccaacccatctgagctg
gccaccacacgcatgctcagacgagtggaaggtacgctatctgccagctctaccaccggt
ccagatcaccacacagctgagcgagaggcgtccaacaggagcccgtcctcatggagcata
gaggaagtgatgcagtttgtgcgggacgcagaccctcaggccctagcgccgcacgccgaa
ctcttcaggaagcatgagatcgatggcaaggctttaatgctgctgcgaagtgacatgatc
atgaagtacatgggcctaaagctgggtcctgctcttaaactgtgccatcatattgaaaaa
ctgaaacagggcaaactgtag
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