Ictalurus punctatus (channel catfish): 108259655
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Entry
108259655 CDS
T04658
Symbol
cars1
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108259655 (cars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ipu01007
]
108259655 (cars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108259655 (cars1)
Enzymes [BR:
ipu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
108259655 (cars1)
Amino acid related enzymes [BR:
ipu01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108259655 (cars1)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108259655 (cars1)
Prokaryotic type
108259655 (cars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
108259655
NCBI-ProteinID:
XP_017314790
Ensembl:
ENSIPUG00000017902
UniProt:
W5UEW9
LinkDB
All DBs
Position
27:13698893..13716905
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AA seq
822 aa
AA seq
DB search
MAGDQAFDYGFLLRISEDGRRAEALNEYLSSRSYLAGYGPSQVDTDAFMLFHGSPPSSQH
VHALRWYRHIATLQPGTDGQASYSTKGKRVQPSWSPPEGSELPNLRLYNSLTRTKELFVP
QHGKKVLWYCCGPTVYDASHMGHARSYISFDILRRILMDYFKYDVFYCMNITDIDDKIIK
RARQNHLLEQYRAKKPKASQILQDVLTAREPFKVKLAETTDPDKKQMLERLDAAVTAALT
PLQGSMKSGAEDAIVQSQAEVLLEEAKDLLSDWLDSQFGSQVTENSIFSLLPKYWEGEYH
KDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGYESNGSVYFDTAKFDASSEHSYA
KLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGW
HIECSAMAGSILGSSMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHTGHLTIAG
CKMSKSLKNFITIKDALARNTARQLRLAFLMHSWKDTLDYSCNTMESAIQYEKFMNEFFL
NVKDILRTPTDITGQFEKWEAEEIDLNKSFYEKKEGVHEALCDNIDTRTALEEMRALVGQ
SNTYMAARKSARLLPNRMLLQSIAHYLTDMFKTFGAIEGTEPIGFPVGRNDQNVDLESTV
MPYLKVLSDFREAIRKIAREQKVTEVLQLCDTVRDDILPELGVRLEDHEGLNTVVKLVDR
ETLLKEREEKKKLEEEKRKKKEEAARKKQEQEVAKLAKMKIPPSEMFRSETDKYSSFDDT
GFPTHDTEGKELSKGQTKKLRKLYEAQEKLYNEYLQATQNGS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagaccaagcctttgattatggcttcttactgcgcataagcgaggacggccgc
agggccgaggctctgaacgagtacctgagcagccgcagttacctggcaggctacgggccc
tcgcaggtggacacagacgcattcatgctttttcacggttcgcctccttcatcgcagcat
gtgcacgctctgcgctggtacaggcacatagccacactgcagcctggaaccgacggccag
gcctcatactccacaaagggaaagagagtgcagccttcgtggtctccaccggagggaagt
gaactcccaaatcttagactttacaacagcctgactcggaccaaggagctgtttgtccct
cagcatgggaaaaaggttttgtggtactgctgtggccccaccgtctatgatgcttcccac
atgggtcatgccaggtcctacatttctttcgacatcctaagaagaatcttgatggactat
ttcaaatatgacgtcttctactgcatgaacatcaccgacattgacgacaaaatcattaaa
cgagccagacagaatcacctgctggagcagtacagagccaaaaagcccaaagcctcccag
atcctgcaggacgtcttaactgctagagagccctttaaagtcaagctcgcagaaaccaca
gacccagataaaaagcagatgttggagagactggatgcagcggtgactgctgcactgact
ccactacagggatcgatgaaaagcggagctgaggatgctatcgttcagagtcaggctgag
gttttactagaagaagccaaggaccttttgtctgattggttggattcccagtttggcagc
caagtaacagaaaactcaatattctccctcttaccgaaatactgggagggagagtatcac
aaagacatggaagccctcaatgttcttccacctgatgtcctcacacgggtcagtgaatat
gttccggagattgtggagtttgtaaagaaaatagtggacaatggatacggttatgagtct
aatggctcagtgtatttcgacactgccaagtttgatgctagttcagaacattcgtatgct
aaactggtgccagaagcagtgggtgaccagaaggctctgcaggagggagaaggagacttg
agtatctcagcagaccggctgagtgagaagcgttcacagaatgactttgccctgtggaag
gcctctaaacctggagaaccgtcctgggattctccatggggaaagggacgacctggttgg
cacatcgagtgttcagccatggctggctccatattaggctcatctatggatattcatgga
ggaggatttgacttgcgtttccctcatcacgacaatgaactggcgcagtccgaggcctac
tttgacaatgaccactgggtacgctatttcttgcacacgggccaccttaccatcgccggc
tgcaagatgtctaagtccctgaagaactttatcaccattaaagatgccctcgcaagaaac
acagcaaggcagctgcgcctggccttcctcatgcactcgtggaaggacacactggattac
tcctgtaacaccatggagtctgccattcagtacgagaagttcatgaatgagttcttcttg
aatgtgaaagatatcctcaggactcccactgatatcacaggtcaatttgagaaatgggag
gcggaggagatcgacctgaacaaaagtttctatgagaagaaagaaggagttcacgaagct
ctatgcgacaatatcgacacacgtacagcgctggaggaaatgagggctctggtgggtcag
agcaacacctacatggctgcaagaaagagtgccagactcctgcctaaccgtatgctgctc
cagagcattgctcattacctcaccgacatgttcaagacatttggggcaatcgagggaaca
gaacccattggatttcctgttggaagaaatgaccaaaatgttgatctggagagtacagtc
atgccctatttaaaggtgctctcagacttcagggaagctatcagaaaaattgcaagggaa
caaaaagtgaccgaagtactgcagctgtgtgacacggtcagagatgacatcctgcctgag
ctcggagtccgattagaagatcatgaaggactcaacactgtggtgaagttagtggacaga
gagactctactcaaggagagggaggagaagaagaagctggaggaggagaagagaaagaag
aaagaggaggcggccagaaagaaacaggaacaagaggtggctaaactggcaaaaatgaaa
attccacctagtgagatgttccgctcagaaactgacaagtactccagctttgatgacacg
ggtttccctacacatgacacagaagggaaggagcttagcaagggacagaccaaaaagctt
cgcaagctttacgaagctcaggaaaaactgtacaacgagtacctccaggcaacccagaac
ggaagctga
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