Ictalurus punctatus (channel catfish): 108259671
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Entry
108259671 CDS
T04658
Symbol
rfx7a
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259671 (rfx7a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Other basic domains
RF-X
108259671 (rfx7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
108259671
NCBI-ProteinID:
XP_017314814
UniProt:
A0A2D0Q942
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All DBs
Position
27:complement(17091743..17111560)
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AA seq
1537 aa
AA seq
DB search
MFRTALRFVSGSDRGLLVRSLPPSSSVPSLITVMADEQQPPGQHPQPGSLLPTGLQGTES
SALQLKIKNSICKSVQSKVDSILQDVERFTDIEKLYLYLRLPSGPSGSCSSDKISEQSCV
SSSRVQQMHAFSWIRNHLEEHADTSLPKQEVFDEYKSYCDNLGYHALSAADFGKIMKNVF
PNMKARRLGMRGKSKYCYSGLRKKPFIHMPSLPNLDVHKAGDGCEGFEPTGQNSSGEDEI
RSAACDLVCEWAQKVLSRQFVSVEDLARFLLNSHYISTKSVAALTVMTGSPSGAPMSVQS
SAFMPTTDAHSFQPQVKTLTSPSIDAKQQLQRKIQKKQQEQKLHSPLPTEAQGRRAEGVT
TPCASTGIPCGSPALLSPQPTIGIVVATVSSPVTVQRSRQLMSPSPVPVATVESKVLPVN
FQVVTQSVQPVNRCPKTPQNVPASPVGDRTARHRYAQILPKPATTSTITLRSPPALLITK
SSIKTVIPTPKNSSVNFMKMTAISLGPSNSTTSTAATTARPASAGVTSRSDDLQPVTRVR
SGSIAAMPLTLSKPGQTTTKPAVNIKLDVVDAVVRAREAQSGTTGGGMQVEGVFKPRAAS
VPTPLAKISAELDRQSGNKFNGQMLPNESNLAAGSNNNPIESTLYQDIANQSTSSAPTTS
INTFMTPPKDAELASPSPRKRQGLHPDSGLTPVKKIYISEGSEDAKLARKIAVKNVSRSD
TPEESELYSAAGKVMMKLTSSAPTRILTFSDSPVGNTGFQTVCSSQNILQGQWEGSSSNV
KNITAGTTAVSAPCQDYQVRNTSFQTFNRPQSVSQGLWEGSSSNTNSKPIVTRTVSAPGQ
ALIQQHANKNTQAMQVGMEQSSSSAVCELNAVLWNNEQQDGNQQQIYSHQGTVKNKQMST
SVMEPPVMTRPIATGQLVQMTTDMVEHVSSQPHVGYFPFNDDDMTQDSIVEELVQMEEQM
KMNSSMPNFDGCEDMALQCQQAALQNSMMSSHQASTSCYNLANTSSTPIHTPTHSAEMIG
MGQGLTRESPCSHFAPTTPVDSALGSSCQTPIGTPHSNCSSGIPPSPVECRNPFAFTPIN
SNITSYRDGSTISSSPVKPMQRPMATHPDKAKLDWMNNNYNSTSSNSNSGISILPNYQNL
VDNQFRKPHAFAIPGQTYPSPVRHHDMHISRLTPISPVQQQVASMANLNKQEGFAVPAPL
DNKTSSSSSGSFRCRSVSPAVRQRNLSGTPNPNVRRYVASPFNSPVTPEVLNIFANSKAN
TSISSMVQRSQSVPVNVMMQTEVLPMQAGGQKSNTKNITNVLLNKMDGDGENVLRGLGMN
NMPSSYTARMNLSQILETTAASSFHASANHQAMISPGSSAYRFTKPAYLMKNNGGDQISF
SAREAPRQSVSKENKQLSEEQQNQALMVQPQQDLQQHQHQQSFLFNTTDKDLLDEDSLNA
ISQLPGQATEFGTGGSEFPGDMQLTSELSSSMNDLNTLDANLLFDPAAGQQQVQYEEPTL
EELKNDPIFQQICNETVNSAGFDWLESKDQTTVEMLG
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgttccggacagcactgcgttttgtttctggttcagatcgtggcctgcttgttagatct
ctccctccttcttcctccgtcccgagtctgatcactgtgatggctgatgagcagcagccc
ccgggacagcaccctcagcccgggtctctgcttcccacaggactgcaaggaaccgaaagc
agtgcattacagctgaaaataaagaactctatctgcaaatcagtccaatcgaaggtggac
agcattctgcaagatgtggagaggtttacagacattgagaaactttacctgtacctccgg
ctgccctcgggccccagcggcagctgcagcagcgacaaaatcagcgagcagagctgcgtg
tcttcgagccgcgtgcagcagatgcacgcgttcagctggattcggaatcacctggaggag
cacgcagacacctcgcttcccaaacaggaagtcttcgatgagtacaagagctactgtgac
aatctgggctaccacgctctcagtgccgccgacttcggaaagatcatgaagaacgttttt
cccaacatgaaggcgcgccggctcggcatgaggggcaaatccaagtattgctatagtggc
ctgagaaagaaaccgttcattcacatgccatctcttccaaatctggatgtacacaaagca
ggagatgggtgtgaagggtttgaacctactgggcagaactccagcggggaggatgagatt
cgctctgctgcctgtgatctggtgtgcgagtgggctcagaaagtgctgagtcgtcagttt
gttagtgtggaggacctggcacgcttccttctgaacagccactacataagcaccaagtct
gttgctgctctcaccgtgatgacaggatctccttccggagccccaatgtctgttcagtca
tctgcgttcatgcccacaactgatgcccactcgttccagcctcaggtcaaaacactgaca
tccccttccattgatgccaagcagcagctccagagaaagatccagaagaagcagcaggaa
cagaaacttcactccccacttcctactgaagctcagggcaggagagcagaaggggtcact
actccatgtgcaagcacaggaatcccatgtggaagccctgctctactttcaccacagccc
accatcggcatcgtggtagccacagtttctagcccagttacggttcaaagaagcaggcag
ttgatgtctcccagcccagttcctgtggcaacagtggaaagcaaggtgctccctgtcaat
tttcaggtggttacacaatcagttcagcctgtgaaccgatgtccaaagactcctcagaat
gtccctgcaagtcctgttggtgatcgtaccgctcgccatcgctacgcccaaatcctgcct
aaaccggctacaactagcacaatcacgctacgttcacctcctgcgctccttatcaccaaa
agttccatcaaaactgtcataccgacacccaagaacagctctgtcaactttatgaaaatg
acagccatatctctggggcccagcaacagcaccaccagcactgctgccaccacagctagg
cctgcgtctgcaggagtcaccagccgtagtgatgatctccagcctgttacacgtgtccgt
agcggctcaattgctgcaatgccattgacactatcaaagccaggacaaacaaccacaaaa
ccagcggtcaacatcaagttggatgttgttgatgctgtagtgcgagcaagagaagctcag
agtgggacaactggtgggggtatgcaagtagaaggagtattcaaacccagagctgcaagt
gtgcctacacctctagcgaaaatctctgcggaattggacaggcaatcggggaacaaattt
aatggtcagatgctccctaatgaaagcaatttggctgctggcagcaataataatcccatt
gaaagcactttgtatcaggacatagccaatcagagtaccagtagtgctccaacaacaagt
attaacacatttatgacaccacccaaggatgcagagttggcatctccaagccctcgcaaa
aggcaaggcttacacccagattccggcctgacacctgtcaaaaaaatttacatttctgag
ggaagtgaagatgcaaaattggctaggaaaattgcagtgaagaatgtttccagatcagac
acccctgaagaaagtgaactttattcagctgctggaaaagttatgatgaagcttacctcc
agtgctcctactcgtatccttacattctctgatagtccagttggaaatactggcttccag
actgtctgcagttctcaaaacatcttgcagggacaatgggaagggtcctcctctaatgta
aaaaatatcactgctggtaccacagctgtgagtgctccttgccaggattatcaggtcagg
aatacaagctttcagacctttaacagaccacagagtgtttcccaaggactctgggaaggg
tcttcatccaatacgaacagcaagccaatagttactcgcactgttagcgccccaggtcag
gcgttgatacagcagcatgcaaacaaaaatacccaagccatgcaagtaggtatggagcag
tctagctcctctgcagtatgtgaactgaatgctgtgctttggaataatgagcaacaagat
ggcaatcagcaacaaatttattctcaccaggggacagtaaaaaacaagcaaatgtccact
tctgttatggagcctcctgtgatgactcgacctattgccacaggccagctagtgcagatg
actactgatatggtggaacatgtctcatctcagccccatgtgggttacttcccatttaat
gatgatgatatgactcaggacagtatagtagaggagctagttcagatggaggagcagatg
aagatgaatagttccatgccaaactttgatggctgtgaggacatggcactgcaatgccaa
caggctgccttgcagaacagcatgatgtccagtcaccaggccagcacttcttgctacaac
ttggccaacactagtagcacacctatacacacccccacccacagcgcagagatgatagga
atggggcagggattgacccgtgagagcccctgctcacattttgcccccaccacccccgtg
gacagtgctctgggaagcagctgtcaaaccccaattggaacaccacactcaaactgcagt
agtggcattccgcccagtcctgttgagtgtaggaacccatttgcctttactcctatcaac
tccaacatcacaagttaccgggacggcagcactatctcgtcaagcccggtcaagcccatg
caaagaccaatggccacccacccagataaagctaagctggactggatgaataataactac
aatagcactagtagtaattccaacagtggaattagtattctgcccaactatcagaatctg
gtggataaccagttcaggaaacctcatgcttttgccattcctggccagacatatccatca
ccagtcaggcaccatgacatgcacataagtcgcttgacacctatttcaccagtccagcag
caggtggctagcatggcaaaccttaataaacaggaaggatttgctgttccagccccactt
gataacaaaaccagcagttcctcctctggatcattccgctgccgcagtgtcagtccagca
gtcaggcagcgcaacctgagtggaaccccaaatcccaatgtccgccgttatgtggcctct
ccttttaattcaccagtgacaccggaagtgttgaacatctttgctaatagtaaagcaaat
actagcattagtagtatggtgcagaggagtcagtctgtgccggttaacgtgatgatgcag
acagaggttttgcccatgcaagctggtgggcagaaaagcaacactaaaaacattaccaat
gtcctgctcaacaagatggatggtgatggagaaaatgtgctacgtggacttggcatgaac
aatatgccatccagttacactgctcgcatgaacctctcacaaatcctggaaacaaccgct
gcttctagtttccatgccagtgccaatcaccaggctatgatttcgcctggctcctcagct
tacagatttacaaagcctgcttacctcatgaagaacaatggaggggatcaaataagcttc
tctgcaagagaggccccaaggcagtcagtctcaaaagagaacaagcagctatctgaagag
cagcagaatcaggccttgatggttcaaccacagcaagacctccagcaacatcagcaccag
cagtctttccttttcaatacgactgataaagacctgttagatgaagacagcttgaacgcc
atctcacagcttccaggccaggcgaccgaatttggcactggaggttcagagtttcctggt
gatatgcaactgacctctgaactgtccagtagcatgaatgatttaaacactttagatgca
aaccttctctttgatccagcagcaggtcagcagcaagtgcagtatgaagaaccgacactg
gaggaactgaagaatgacccgattttccaacagatttgcaacgagactgtgaattctgct
ggatttgattggttggagagcaaggaccagacaacagtggaaatgttgggttaa
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integrated database retrieval system
