Ictalurus punctatus (channel catfish): 108259681
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Entry
108259681 CDS
T04658
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259681 (irx3a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
108259681 (irx3a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
108259681
NCBI-ProteinID:
XP_017314829
UniProt:
A0A2D0Q956
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Position
27:14928242..14931903
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AA seq
429 aa
AA seq
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MSFPQLGYQYIRPIYPQERQGIGNARSGSELSPSGTLSNVLSTMYGSPFSAAHTYGAFLP
YSNDLSIFSQLGAQYELKDSPGVQHPAFAHPHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTDEE
GNVYGSDHEGDDGDKREDEEEIDLENIDTEHIESKDELDEQDELHSDSKLDASCDSEISD
GYEDLHGPEPKLLKAVAQEGTDADADAERPDHFHHHHHHLHHHHHHHLPHSLNLKTQPPS
SEQIKLNPVSNSPPAENNAAPVQKPKIWSLAETATSPDNPRKSPLVNGSSSQAVMPPHRL
VSCPVGKLQNWTSRAFSAHQLALLNSNHYLGLANQASANGLALYTGNRHTEERNVSSETA
HSGTSHPPH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggataccagtacatccgaccgatatacccgcaagaacggcaa
gggatcggcaacgcgcgcagcgggagcgagctcagtccgtccggcacgctctccaacgtt
ctctccaccatgtacggatcacctttcagcgctgcacacacctacggagcgtttcttcct
tattcaaacgacctgtcgattttcagtcagttgggagctcagtatgagctaaaagacagt
ccaggtgtccagcacccagcgtttgcccatcctcaccctgctttctacccctacggccag
taccagttcggagacccatccagacccaaaaatgccaccagggagagcacaagcacgctg
aaggcctggctcagcgagcaccgcaagaacccgtatcctaccaagggcgagaagatcatg
ctggccatcatcaccaagatgaccctcacccaggtgtccacatggttcgctaacgcccgg
aggagactgaagaaggagaacaagatgacctggacgccgcgcaaccgcacggacgaagaa
ggcaacgtgtacggcagcgaccacgaaggcgacgatggcgacaagcgcgaggacgaggaa
gagatcgacttggagaacatcgacacggagcacatcgagagcaaggacgagctggacgag
caggacgagctccactcggactccaagctggacgccagctgcgactcggaaatctcggac
ggctatgaggatttacacgggcccgagccgaagcttttaaaagccgtggcccaagagggc
acagacgcggacgcagacgctgagcggcccgatcacttccaccaccatcatcaccaccta
catcaccaccatcaccatcaccttcctcattcattaaacctcaaaacgcagcctcccagc
agcgagcagatcaaactcaacccggtgtccaactctcctccggctgaaaacaacgcagcc
ccggtgcaaaaacctaagatctggtctttggctgagacagccacgagcccggacaatccc
cggaaatctccactcgtcaacgggagctcatcccaggccgtcatgcctcctcatagactc
gtttcatgcccggtgggcaaactgcagaactggacgagccgtgcgttctcggcgcaccag
ctcgcgctgctcaactcaaaccactatttaggactggccaatcaggcttcagccaacggc
ctcgcgctctacactggcaacaggcacacggaagagcgcaatgtcagctcagagactgca
cactcaggtacatcacatccccctcactga
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