Ictalurus punctatus (channel catfish): 108259764
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Entry
108259764 CDS
T04658
Symbol
npas2
Name
(RefSeq) neuronal PAS domain-containing protein 2 isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259764 (npas2)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
108259764 (npas2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
bHLH_IRO3
PAS_4
DDRGK
Motif
Other DBs
NCBI-GeneID:
108259764
NCBI-ProteinID:
XP_053532938
Ensembl:
ENSIPUG00000018202
UniProt:
A0A9F7QU36
LinkDB
All DBs
Position
28:complement(1539807..1572733)
Genome browser
AA seq
847 aa
AA seq
DB search
MDKLSEFGVLCPSSRREWETTSCVDDFMDEDEKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTINFLQKQKEITAQTETCEIQQDWKPSFLSNEEFTQLMLE
AMDGFLIALRLDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLPEREHAEVYKLLSAHLLM
SEHISTDYLEGNETHVEFCCHLVRGNIDPKDVPTYEYVKFVGDFKFQNSVAASSCNGYEL
MFPRPLQTSLEEQMCLVAAVRLVTPQFLKDLCSVEDPCDEFTSRHSLEWKFLFLDHRASP
IIGYLPFEVLGTSGYDYYHVDDLELIAQCHKQLMQCGKGKSCYYRFLTKGQQWIWLQTHY
YITYHQWNSKPEFIVCTHTVVSYAEVRAERRREYGLEESADICTTSVKGQEVCLDVCAPM
DAPRDRIGSARSASSHSSHKSTHTAPSDSASNSSVRYKESCTSSRQSASIATENSNRLSH
GTSKTLIQRQASLEPLPPSPSCSQASVMHQAVCAGLPQPQLGVMHQLTEHLEKRRLILQH
DIKTQQQELHHIKEKLELTNLQMLLQQPVHVDFPQQASAPNSQSGVLHHNNTQHPKPPHC
TPHTASAHTLHREQPSSSTTQQRLVQMQSMCVPVQTHTSLTMPLYSNPMMFSPNQGYRNT
LDTHTHHAQHTHRQTDADNGPGGQLRMLLNQPVQNLVPDSSGTPTSHFSTTIHQTKYLDQ
QMMAPSFPVQQVSCNAVLVPSPVFTSPIVITHNSFITPRAPPTYTPNPQNTQQGLHIQQH
QQFFQMQPQGLIQSGPSQAFFHTTNIQPQSTVGYIQQQQPQQQQQQQHLHSQPSASSLSD
YRNILPR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctttccgaatttggcgtcctttgtccgtccagcaggagggaatgggaaacc
accagctgtgtggatgattttatggacgaagatgagaaagacagggctaaaagggcatcc
cggaataaatccgagaagaaaaggcgagaccagttcaatgtgctcattaaggagctgtgc
acaatgctgcagggccaaggccacccacgcaaaatggacaagtccaccatcctgcagagg
accatcaacttcttgcaaaagcagaaagagattacggcacagacggagacctgtgagatt
cagcaggactggaagccttcttttctcagcaacgaggaatttacccagttgatgctggag
gcaatggatggtttcctgattgcacttaggctggacgggaacatcatctacgtatctgac
agcgtctcctctctcatcgggcatttaccatcagacatggtggaccaaaacatcctgaat
ttcctgcctgagcgtgaacatgccgaggtctacaaactgctctcagcacacctgctcatg
agcgagcacatcagcacggactacctggagggcaatgagacccatgtcgagttctgctgc
cacttagtccgagggaacatcgacccgaaagacgtgcccacgtacgagtatgtcaaattc
gtcggagacttcaagttccagaacagtgtggctgcttcatcatgtaatggctacgagctg
atgtttccccgtccgctgcagacctcactggaggagcagatgtgtttagtggctgcagtt
agactggtcacaccacagttcctaaaggacttgtgtagcgtggaagacccatgtgatgaa
ttcacatcgagacacagcctagagtggaagttcctctttttagaccacagggcctccccc
atcatcggctacctgccgtttgaggtgttggggacgtcgggatacgattattatcacgtg
gatgatctggagctcatcgctcagtgccacaagcagctgatgcagtgtgggaaggggaag
tcgtgctattatcgcttcctgactaaagggcagcagtggatctggctgcagacgcactac
tacatcacctaccaccagtggaactccaaacccgagttcatcgtctgtacacacactgta
gtcagttatgctgaggttcgtgctgagaggaggagagagtacgggctggaggagagcgct
gatatttgcaccacctcagtaaaggggcaggaggtgtgcctggatgtgtgtgctcctatg
gatgcaccgcgagacagaatcggcagcgctcgatcagcttcttcacacagttcacacaaa
tccacacacactgcaccgtctgactcggcgtcaaactcttcggtccggtataaagaaagc
tgcacgtcgtcacggcagtcggcgtctatagcaaccgagaactccaacaggctgagccac
ggaacctcaaagaccctgattcagagacaggcctcattggagcccctccccccctccccc
tcctgcagccaagcctcagtcatgcaccaggctgtgtgtgcaggtcttcctcagcctcag
ttaggagtgatgcaccagctgacggagcacctggagaagcggagactcatcctgcagcac
gacatcaaaacccagcaacaggaactccatcacatcaaagagaaactagagctcactaac
ctgcagatgttgctgcagcagcctgtgcatgtggattttcctcagcaggcttcagctcca
aatagccagtcaggagtccttcaccacaacaacacacaacaccccaaacccccacactgc
acaccacacacagcctcggctcacacactgcaccgagagcagcccagcagctccaccacg
cagcagaggctggtgcagatgcagagcatgtgtgtcccggtccaaacacacaccagcctg
acgatgccgctctacagcaaccccatgatgttctcgccgaaccagggataccgcaacaca
ctggacacacacacacaccatgcgcaacacacccaccggcaaacagatgcagacaacggg
cctggcggacagctacggatgttgttaaaccagccggtgcagaatctggttccagacagc
agtggaacaccgacatcacacttcagcaccaccatccatcaaaccaaatatttggaccag
cagatgatggccccctctttcccggtgcagcaggtcagctgtaatgccgttctagtcccc
tcccctgtgttcacgtcaccaatcgtgatcacccacaacagtttcatcactcctcgggcc
ccgcccacctacacgcccaacccccagaacactcagcagggcctgcacatccaacaacat
cagcagttctttcagatgcagccgcagggtctcattcagagcggccccagtcaggccttt
ttccacacaaccaacatccagccgcaaagcactgtgggatacatacagcaacaacaaccg
caacaacagcagcagcagcagcaccttcattcccagccttcagcaagcagcctatcagat
tacagaaacatccttccacggtag
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integrated database retrieval system
