Ictalurus punctatus (channel catfish): 108259765
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Entry
108259765 CDS
T04658
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108259765 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108259765 (sptbn4a)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108259765 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
108259765 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
108259765
NCBI-ProteinID:
XP_047007934
UniProt:
A0A979EDF7
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All DBs
Position
28:1637010..1658982
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AA seq
1446 aa
AA seq
DB search
MLMPREGGRDEAQKLHRKWMKHQAFMAELARNKEWLAKIEQEGKELIEEQPELGPVVHQK
LKEMRECWTHLESTTKAKARQLFETQNHRTTDVPPHSLSDLDQHLSMLQDEPPHSSHSSH
AAYSTHTSPSASASILSPRTTFSQQLQRIKSMEAQMQLYPGLMQLKSDISGQSDVDGADM
LHHGPMGIEGQGSGGVAETRIVRLIEPLKERRRILLASKEMHQVTQDLEDEIVWIQERLP
LASSTEYGTNMQSVQQLVKTHEALQMEMQARKGRVEEVLDRAEAVAALRTPEVEIVREGA
MHVRQLWEVLQVETERRTVMLDAVSHAQQYYTEAAKAESWLSGQKLHVLNEEDGNDEAST
LRLLKEQLALEQKVETYAETVGFLSQQCRRMLELGHPDSEQITKQQAHIDRLYVSLKDLV
EQKKTKLEQQYWLYQLKKEVEALEKWISEREAVASSTELGQDLEHVTALQERFTEFRAET
STAGQRQMDSVNKMVNEMIDCGHADAATIAEWKDGLNESWADLQELMETRAQMLAASYQL
HKFFTNCQEVLVQIEGKMRQLPEVRSCQVSTANPGTLQRVLHSFEHSLQLLVSQVRQLQE
NASQLRAIYAGEKADTILVREQEVMRAWKELLMACEGSRVQVTTVTDKIQFFAMVRELSM
WTDGIMGQIGPVDDPRDVSTLECMISQHQNLKSKMESKSKSFMHCVEMGKMLLAAHNPAA
EEVKEKLEYVMAKQKDLNDKWEQHWEKLQRMQQRMKSAQASKAEGTFHATKESLSSGGEA
EGGADEVEQLIRRHEAFRKAASTWKEHFNSLRQAEKLKEEQSKQSTTSSLLNRQMFPLSC
LVPSSSSSSSSSSLFRSPLQDMLLEPKSGPDLTHTPHAFAQRLGSALNPYAPIMNGSPYH
RLNQQVGALGTNSSSQTGLNQQGVFGVDSSSYTGLNQVGMLGSDSSSYTGLNQSGVTGAN
GLNPLSAMGMTEPKTAFAWQQLKADFQPRINHMHKAVGPLLEAHARHLVPTGVPVGTEAS
LELLHGRLQRDPRGSRSDPQMDHLRREREYRLGRHTSSEQEIQARLNELPMIVRQERHQR
RRLERQSSSEHEGSGRQRLPKQDSSDKESGKEGSDKKQTGEKRSTMAEIVEQVQEREACQ
ARGEVYRPSSSLSAPVSRLDRPRARDRPKPRRRPRPKEPEETRRSRSAPAQSAPSTPQPP
THTVHQEGFLYRKHEEEGKEKSPNSKSWVNLYCVLNKGEIGFYKDARNTTTPYNDEPLLN
LAICTFDTTNGYKKKKNVFILRSETDGDYIFLAKDEEDLKRWVNSINASLSEIEEIAKWE
KPTTSSTDPDKSERKERSEGAEPSEKSERSDQSDKREGEKSSESSEKRDTLERVRVERRG
RERGDRGDRERERERDRGERGERGDRERERERERGERGERGERERERERERGDRSSRGSS
TSGKSK
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgcctcgtgaaggcgggcgggatgaggctcagaagctgcacagaaaatggatg
aaacaccaggccttcatggccgaactggctcgcaacaaagaatggctcgccaaaatcgaa
caggagggcaaggagctgatcgaggagcagcctgagcttgggcctgtggtgcaccagaag
ctgaaggagatgagggaatgctggacacatctggagagcaccaccaaggccaaagctcgt
cagctgttcgagacacagaaccacagaaccacagatgttccaccgcacagcctttcggat
ctggaccagcacctcagcatgctccaggacgagccaccacattcgtcacactcctcacac
gcagcatactccacacacaccagcccctcggccagcgcctccatcctgagccctcggacc
acatttagccagcaactgcaaaggataaagtcaatggaggctcagatgcagctctatcct
ggtttaatgcagctgaagtcggacattagcggacagagtgatgtagacggagccgacatg
ctccaccatgggccaatgggtatcgagggccagggctcggggggtgtggctgagacgcga
attgtgcgtctgattgagccactgaaagaaaggaggcggatccttctggcctccaaagaa
atgcaccaagtcactcaggacctggaagacgagattgtgtggattcaggagcgattaccg
ttggcctcctctacggaatacggcaccaatatgcagagcgttcagcagcttgttaaaacc
cacgaggccttgcagatggagatgcaggctagaaaggggcgtgtcgaggaggtgctggac
agagccgaggcagtcgccgcccttcgcactcctgaggtggagattgtcagagagggagca
atgcacgtgaggcagctgtgggaggtgctacaggtggagacggagcgtcgtacggtgatg
ctggatgcggtaagccacgcccagcaatactacaccgaggcagcgaaggcggagtcgtgg
ctcagcgggcaaaagcttcatgttctcaatgaggaggacggcaacgatgaagcgagcacg
ctaaggctgctgaaggaacagttggctttagagcagaaggtggagacttacgcagagacc
gtggggttcctgtctcagcagtgccgccgcatgttggagctgggacaccctgacagtgag
cagatcactaagcagcaggcgcacatcgaccggctctacgtctccctgaaggacctggtg
gagcagaagaagaccaagctggagcagcagtactggctctaccagctgaagaaggaggtg
gaggctctggagaaatggatctctgagagagaggctgtagccagctccactgagctcggc
caggatctggagcatgtcacggcgctgcaggagaggttcaccgagtttcgggccgaaaca
agcaccgctggtcagaggcagatggactcggtgaacaagatggtgaatgagatgatcgac
tgcggccacgcagatgctgccaccattgccgagtggaaggacggcctgaacgagtcctgg
gccgacctgcaggagctgatggagaccagagcacagatgcttgccgcctcataccagctc
cacaagttcttcaccaactgccaggaggtgctggtgcagattgaggggaagatgagacag
ttaccggaggtgcgttcgtgtcaggtgagcactgccaaccccggcacactacagagagtg
ctacactcctttgaacactctctgcagctgcttgtttcacaggtgcgtcagctgcaagag
aacgcgtctcagctccgtgcaatctacgctggcgagaaggctgacaccatcttggtccgt
gaacaggaagtgatgcgtgcgtggaaggagctcctcatggcgtgcgagggcagtcgtgtg
caggttaccacggtgacggacaaaatccagttcttcgccatggtgcgtgagctcagcatg
tggacagacgggatcatgggacaaatcggcccggtcgacgatccacgggatgtgtccact
ttggagtgcatgatctcccagcaccaaaacctaaagagtaaaatggagagcaaaagcaag
agtttcatgcactgtgtggagatgggcaagatgttgctcgcggcacacaatcctgcagct
gaggaggtaaaggagaagttggagtatgtgatggcgaagcagaaagatctgaatgataag
tgggagcagcactgggagaaactccagcgcatgcagcagcggatgaagtctgcacaagca
agcaaggctgaagggacgtttcacgctacgaaggagtcgctgagcagcggtggtgaggca
gagggcggggctgacgaggtggagcagctgattcgccgacatgaagcgttccgtaaggcg
gcatctacctggaaggagcacttcaactccttacgacaggcagagaaattgaaagaagag
caaagcaagcagtccaccacctcgtctctcctcaacagacaaatgtttcctttgtcctgc
ctcgtgcccagctcttcctcgtcctcttcttcctcgtctcttttccggagccctctgcag
gacatgctcctcgagcccaaatctggtccagaccttacacataccccacacgcttttgcc
cagaggctcggatctgcactgaatccctacgctcccatcatgaatggctccccctaccat
aggctcaaccaacaagtcggggcgttgggcacaaacagctccagtcaaaccgggttaaac
caacagggtgtttttggggtggacagctcgagttacactggcctaaaccaggtcggcatg
ttgggttcagacagctccagctacactggattaaaccaatctggtgtcacaggggccaat
ggcctgaaccccctcagcgctatgggtatgactgaacccaaaaccgcattcgcctggcag
cagctcaaagctgacttccagcccaggatcaatcacatgcacaaggctgtaggtcctctg
ctagaggcccacgccaggcacctggtcccaacaggagtgccagtgggcaccgaggcatcc
ctggagttgctccacggacggctgcagagggaccctcgcggcagccgctcagacccgcag
atggaccacctgcgcagggagagggagtaccggctcgggcgccacacctccagtgagcag
gagatccaggcgcggctcaacgagctgcccatgattgtgcgccaggagaggcaccagcgg
cgcagactagagcgtcaatcgtccagcgagcatgagggcagtggcaggcagagacttccg
aaacaggactccagcgacaaggagtcggggaaagaagggtcagacaagaagcagacaggg
gaaaaacgctccaccatggcggagattgttgaacaggtgcaggagagagaagcatgccaa
gcgaggggagaggtgtatcgtccttccagcagtctctccgcccctgtctcccgtcttgac
cggcctcgtgctcgtgatcgaccgaaaccacgccgacggccgcgtcccaaagaacccgag
gagacgcggcggtcacggtcagcaccggctcagagtgcgccaagcacgccacagccaccc
acgcataccgttcaccaggagggcttcctgtaccgcaaacacgaagaggagggcaaggaa
aagagccccaacagcaagtcgtgggtgaacttgtactgcgtgctcaacaaaggcgagatc
ggattctacaaggacgccaggaacacgacgaccccgtacaacgacgagccgctcctcaac
ctagccatctgtaccttcgacaccaccaacggctacaaaaagaagaagaacgtcttcatc
ctgaggagtgaaaccgatggggactatatcttcctggccaaagacgaggaggacctgaag
cgttgggtgaacagcataaacgccagcctgagcgaaatcgaggagatcgccaagtgggag
aaacccaccacctcctccaccgaccctgacaaatcagaacgcaaggagcgctccgagggg
gcggagccatcggagaagtcggagcgctcggatcagtcggacaagcgagagggggagaag
agctctgaaagctccgaaaagagggacacgttggagagagtgagggtggagcgacgaggg
agggagagaggagacagaggagacagagagagagagagggagagggacagaggagaaaga
ggtgagagaggagacagagagagagagagggagagagagagaggagaaagaggagagaga
ggagaaagagagagggagagggagagggagaggggagaccggagttccaggggttcgagc
acctctgggaaaagtaaatga
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