Ictalurus punctatus (channel catfish): 108259765
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Entry
108259765 CDS
T04658
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04517
IgSF CAM signaling
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108259765 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108259765 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108259765 (sptbn4a)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108259765 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
108259765 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
108259765
NCBI-ProteinID:
XP_047007934
UniProt:
A0A979EDF7
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All DBs
Position
28:1637010..1658982
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AA seq
1446 aa
AA seq
DB search
MLMPREGGRDEAQKLHRKWMKHQAFMAELARNKEWLAKIEQEGKELIEEQPELGPVVHQK
LKEMRECWTHLESTTKAKARQLFETQNHRTTDVPPHSLSDLDQHLSMLQDEPPHSSHSSH
AAYSTHTSPSASASILSPRTTFSQQLQRIKSMEAQMQLYPGLMQLKSDISGQSDVDGADM
LHHGPMGIEGQGSGGVAETRIVRLIEPLKERRRILLASKEMHQVTQDLEDEIVWIQERLP
LASSTEYGTNMQSVQQLVKTHEALQMEMQARKGRVEEVLDRAEAVAALRTPEVEIVREGA
MHVRQLWEVLQVETERRTVMLDAVSHAQQYYTEAAKAESWLSGQKLHVLNEEDGNDEAST
LRLLKEQLALEQKVETYAETVGFLSQQCRRMLELGHPDSEQITKQQAHIDRLYVSLKDLV
EQKKTKLEQQYWLYQLKKEVEALEKWISEREAVASSTELGQDLEHVTALQERFTEFRAET
STAGQRQMDSVNKMVNEMIDCGHADAATIAEWKDGLNESWADLQELMETRAQMLAASYQL
HKFFTNCQEVLVQIEGKMRQLPEVRSCQVSTANPGTLQRVLHSFEHSLQLLVSQVRQLQE
NASQLRAIYAGEKADTILVREQEVMRAWKELLMACEGSRVQVTTVTDKIQFFAMVRELSM
WTDGIMGQIGPVDDPRDVSTLECMISQHQNLKSKMESKSKSFMHCVEMGKMLLAAHNPAA
EEVKEKLEYVMAKQKDLNDKWEQHWEKLQRMQQRMKSAQASKAEGTFHATKESLSSGGEA
EGGADEVEQLIRRHEAFRKAASTWKEHFNSLRQAEKLKEEQSKQSTTSSLLNRQMFPLSC
LVPSSSSSSSSSSLFRSPLQDMLLEPKSGPDLTHTPHAFAQRLGSALNPYAPIMNGSPYH
RLNQQVGALGTNSSSQTGLNQQGVFGVDSSSYTGLNQVGMLGSDSSSYTGLNQSGVTGAN
GLNPLSAMGMTEPKTAFAWQQLKADFQPRINHMHKAVGPLLEAHARHLVPTGVPVGTEAS
LELLHGRLQRDPRGSRSDPQMDHLRREREYRLGRHTSSEQEIQARLNELPMIVRQERHQR
RRLERQSSSEHEGSGRQRLPKQDSSDKESGKEGSDKKQTGEKRSTMAEIVEQVQEREACQ
ARGEVYRPSSSLSAPVSRLDRPRARDRPKPRRRPRPKEPEETRRSRSAPAQSAPSTPQPP
THTVHQEGFLYRKHEEEGKEKSPNSKSWVNLYCVLNKGEIGFYKDARNTTTPYNDEPLLN
LAICTFDTTNGYKKKKNVFILRSETDGDYIFLAKDEEDLKRWVNSINASLSEIEEIAKWE
KPTTSSTDPDKSERKERSEGAEPSEKSERSDQSDKREGEKSSESSEKRDTLERVRVERRG
RERGDRGDRERERERDRGERGERGDRERERERERGERGERGERERERERERGDRSSRGSS
TSGKSK
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgcctcgtgaaggcgggcgggatgaggctcagaagctgcacagaaaatggatg
aaacaccaggccttcatggccgaactggctcgcaacaaagaatggctcgccaaaatcgaa
caggagggcaaggagctgatcgaggagcagcctgagcttgggcctgtggtgcaccagaag
ctgaaggagatgagggaatgctggacacatctggagagcaccaccaaggccaaagctcgt
cagctgttcgagacacagaaccacagaaccacagatgttccaccgcacagcctttcggat
ctggaccagcacctcagcatgctccaggacgagccaccacattcgtcacactcctcacac
gcagcatactccacacacaccagcccctcggccagcgcctccatcctgagccctcggacc
acatttagccagcaactgcaaaggataaagtcaatggaggctcagatgcagctctatcct
ggtttaatgcagctgaagtcggacattagcggacagagtgatgtagacggagccgacatg
ctccaccatgggccaatgggtatcgagggccagggctcggggggtgtggctgagacgcga
attgtgcgtctgattgagccactgaaagaaaggaggcggatccttctggcctccaaagaa
atgcaccaagtcactcaggacctggaagacgagattgtgtggattcaggagcgattaccg
ttggcctcctctacggaatacggcaccaatatgcagagcgttcagcagcttgttaaaacc
cacgaggccttgcagatggagatgcaggctagaaaggggcgtgtcgaggaggtgctggac
agagccgaggcagtcgccgcccttcgcactcctgaggtggagattgtcagagagggagca
atgcacgtgaggcagctgtgggaggtgctacaggtggagacggagcgtcgtacggtgatg
ctggatgcggtaagccacgcccagcaatactacaccgaggcagcgaaggcggagtcgtgg
ctcagcgggcaaaagcttcatgttctcaatgaggaggacggcaacgatgaagcgagcacg
ctaaggctgctgaaggaacagttggctttagagcagaaggtggagacttacgcagagacc
gtggggttcctgtctcagcagtgccgccgcatgttggagctgggacaccctgacagtgag
cagatcactaagcagcaggcgcacatcgaccggctctacgtctccctgaaggacctggtg
gagcagaagaagaccaagctggagcagcagtactggctctaccagctgaagaaggaggtg
gaggctctggagaaatggatctctgagagagaggctgtagccagctccactgagctcggc
caggatctggagcatgtcacggcgctgcaggagaggttcaccgagtttcgggccgaaaca
agcaccgctggtcagaggcagatggactcggtgaacaagatggtgaatgagatgatcgac
tgcggccacgcagatgctgccaccattgccgagtggaaggacggcctgaacgagtcctgg
gccgacctgcaggagctgatggagaccagagcacagatgcttgccgcctcataccagctc
cacaagttcttcaccaactgccaggaggtgctggtgcagattgaggggaagatgagacag
ttaccggaggtgcgttcgtgtcaggtgagcactgccaaccccggcacactacagagagtg
ctacactcctttgaacactctctgcagctgcttgtttcacaggtgcgtcagctgcaagag
aacgcgtctcagctccgtgcaatctacgctggcgagaaggctgacaccatcttggtccgt
gaacaggaagtgatgcgtgcgtggaaggagctcctcatggcgtgcgagggcagtcgtgtg
caggttaccacggtgacggacaaaatccagttcttcgccatggtgcgtgagctcagcatg
tggacagacgggatcatgggacaaatcggcccggtcgacgatccacgggatgtgtccact
ttggagtgcatgatctcccagcaccaaaacctaaagagtaaaatggagagcaaaagcaag
agtttcatgcactgtgtggagatgggcaagatgttgctcgcggcacacaatcctgcagct
gaggaggtaaaggagaagttggagtatgtgatggcgaagcagaaagatctgaatgataag
tgggagcagcactgggagaaactccagcgcatgcagcagcggatgaagtctgcacaagca
agcaaggctgaagggacgtttcacgctacgaaggagtcgctgagcagcggtggtgaggca
gagggcggggctgacgaggtggagcagctgattcgccgacatgaagcgttccgtaaggcg
gcatctacctggaaggagcacttcaactccttacgacaggcagagaaattgaaagaagag
caaagcaagcagtccaccacctcgtctctcctcaacagacaaatgtttcctttgtcctgc
ctcgtgcccagctcttcctcgtcctcttcttcctcgtctcttttccggagccctctgcag
gacatgctcctcgagcccaaatctggtccagaccttacacataccccacacgcttttgcc
cagaggctcggatctgcactgaatccctacgctcccatcatgaatggctccccctaccat
aggctcaaccaacaagtcggggcgttgggcacaaacagctccagtcaaaccgggttaaac
caacagggtgtttttggggtggacagctcgagttacactggcctaaaccaggtcggcatg
ttgggttcagacagctccagctacactggattaaaccaatctggtgtcacaggggccaat
ggcctgaaccccctcagcgctatgggtatgactgaacccaaaaccgcattcgcctggcag
cagctcaaagctgacttccagcccaggatcaatcacatgcacaaggctgtaggtcctctg
ctagaggcccacgccaggcacctggtcccaacaggagtgccagtgggcaccgaggcatcc
ctggagttgctccacggacggctgcagagggaccctcgcggcagccgctcagacccgcag
atggaccacctgcgcagggagagggagtaccggctcgggcgccacacctccagtgagcag
gagatccaggcgcggctcaacgagctgcccatgattgtgcgccaggagaggcaccagcgg
cgcagactagagcgtcaatcgtccagcgagcatgagggcagtggcaggcagagacttccg
aaacaggactccagcgacaaggagtcggggaaagaagggtcagacaagaagcagacaggg
gaaaaacgctccaccatggcggagattgttgaacaggtgcaggagagagaagcatgccaa
gcgaggggagaggtgtatcgtccttccagcagtctctccgcccctgtctcccgtcttgac
cggcctcgtgctcgtgatcgaccgaaaccacgccgacggccgcgtcccaaagaacccgag
gagacgcggcggtcacggtcagcaccggctcagagtgcgccaagcacgccacagccaccc
acgcataccgttcaccaggagggcttcctgtaccgcaaacacgaagaggagggcaaggaa
aagagccccaacagcaagtcgtgggtgaacttgtactgcgtgctcaacaaaggcgagatc
ggattctacaaggacgccaggaacacgacgaccccgtacaacgacgagccgctcctcaac
ctagccatctgtaccttcgacaccaccaacggctacaaaaagaagaagaacgtcttcatc
ctgaggagtgaaaccgatggggactatatcttcctggccaaagacgaggaggacctgaag
cgttgggtgaacagcataaacgccagcctgagcgaaatcgaggagatcgccaagtgggag
aaacccaccacctcctccaccgaccctgacaaatcagaacgcaaggagcgctccgagggg
gcggagccatcggagaagtcggagcgctcggatcagtcggacaagcgagagggggagaag
agctctgaaagctccgaaaagagggacacgttggagagagtgagggtggagcgacgaggg
agggagagaggagacagaggagacagagagagagagagggagagggacagaggagaaaga
ggtgagagaggagacagagagagagagagggagagagagagaggagaaagaggagagaga
ggagaaagagagagggagagggagagggagaggggagaccggagttccaggggttcgagc
acctctgggaaaagtaaatga
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