Ictalurus punctatus (channel catfish): 108259767
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Entry
108259767 CDS
T04658
Symbol
myo1ca
Name
(RefSeq) unconventional myosin-Ic isoform X1
KO
K10356
myosin I
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108259767 (myo1ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ipu01009
]
108259767 (myo1ca)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259767 (myo1ca)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108259767 (myo1ca)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108259767 (myo1ca)
04147 Exosome [BR:
ipu04147
]
108259767 (myo1ca)
Protein phosphatases and associated proteins [BR:
ipu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108259767 (myo1ca)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
Others
108259767 (myo1ca)
Others
Actin-binding proteins
Myosins
108259767 (myo1ca)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108259767 (myo1ca)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108259767 (myo1ca)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108259767 (myo1ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
AAA_22
UTP15_C
Zeta_toxin
AAA_16
TsaE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
108259767
NCBI-ProteinID:
XP_053532981
Ensembl:
ENSIPUG00000021454
UniProt:
A0A9F7THF1
LinkDB
All DBs
Position
28:complement(2120129..2146363)
Genome browser
AA seq
1089 aa
AA seq
DB search
MCIRGVEVEVDGGVRLVMESSLSARDRVGVQDFLLLDNHTSEAAFIENLRRRYKENLIYT
YIGSVLVSVNPYKELGIYSKANMERYRGVNFYEISPHIFGLADNSYRALRTTRKDQCILI
SGESGAGKTEASKKILQYYTATCPTRNNTHSIRERLLQSIPVLEAFGNAKTLRNDNSSRF
GKYMDLQFDYKGAPIGGHILNYLLEKSRVVHQNHGERNFHIFYQLLESGDSSLLTRLGLD
MTNPQHYRYLVKGNCPRVSTISDKSSWKAVSKGLTVIGFNEEEVEELLKVVASVLHLGNT
LFGEDEYGQTHFTTETPLTYLTELLGVEGSALSEALTHKKIVAKGEEMIGPLTLEQALSA
RDALAKAIYGRTFTWLVQKINQSLAFQDEVYYTSRCSSVIGLLDIYGFEVFQSNSFEQFC
INYCNEKLQQLFIEVTLKSEQEEYEAEGIGWESVEYFNNKIICDLVEEKFKGIIAILDEE
CLRPGDATDITFLEKLEDSLGGHAHFMTHKLANGKSRKAVGREEFRLLHYAGAVNYNVNG
FLDKNNDLLYRNLKEVMCQSRNSIVKQCFHPDELTDQRRPETVTHTHTHTHTHTHTHTHT
TTTTTLSLSLSLSLSLSQLLCFQAATQFKLSLAKLMEILMSKEPSYVRCIKPTDTKQPER
FEEVLVRHQVKYLGLMENLRVRRAGFAYRRSFEAFLQRYKPLCPDTWPNWQGKLSDGVST
LVKHLDYKPEEYKLGRSKIFIRFPKTLFRTEDALELKKPTIAITLQKCWRGYREWAKYQR
IRHATITIQSWWRGVKGRRRAKRRRQAVDTIRTLIKGFILRHEPRCPDNEYFLDHVRFSY
LMTIKRNLPKSVLDRTWPVPPPSLEEASVYIHRLCIRNMVNDYCRKIQPEWKNQLEQKVV
ASGMFRGQKDSYPQSVPRLFVGTRLENEEINLKVRQTLGSENKVKYGVPVIKYDRHGYRA
RPRQLLMTGSSVVLVQESKIKQRIDYGSLLGISVSSLSDGFFVLHVPTADSKQKGDLVLQ
SDHVIEAVTKLAVMSDKIHVVNVSQDSIRFAIARGKEGIIDFTCGAELRVVKAKNGHLAV
TAPRINSSV
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtgcattaggggtgtggaggtggaggtggatggaggcgtgaggctggtgatggagagc
tctctgtcagcgagggatagggtgggtgtgcaggatttcctgcttctggacaaccacacg
agcgaagcggctttcatcgagaacctgcggcggcgttataaagagaacctcatatacacg
tatatcggctcggtgctggtgtcggtgaatccgtacaaagagctcggaatctactccaaa
gcaaacatggagcgctacagaggagtcaacttctatgagatttcaccacacatcttcggc
ttggcggataactcgtaccgtgccctgcgcaccacgcgtaaggatcagtgcatcctgatc
tcaggagagagcggggcaggaaagacagaggcatcgaaaaaaatcctgcagtactacacc
gcaacctgccccacacgcaacaacacacactccatccgagagaggctgctgcagtccatc
cccgtgctggaggcgtttgggaacgccaaaacgttgcgtaatgacaactccagccgcttc
ggaaaatacatggatttgcagtttgactacaagggtgccccgatcggcggccacatcctg
aactaccttctggagaagtctcgggtggtgcaccaaaaccacggagagaggaacttccac
atcttctaccagctgctggagtcaggggacagctcgctgctgacgaggctggggctggac
atgaccaacccacagcactaccgctacctggtgaagggcaactgtccaagggtgagtacc
atcagcgataagagcagctggaaagctgtaagcaaaggtctgaccgtcattggcttcaac
gaggaggaagtggaggagctactgaaggtcgttgcgagtgttctgcatttgggaaacacc
ctgtttggagaggatgagtacgggcagacacacttcaccacggagactccgctcacatac
ctcacagagctgctgggtgtggaaggctcagctctgagtgaagctcttactcataagaag
attgttgctaaaggagaggagatgattggcccgctgaccctcgagcaggctctctcggct
cgagacgccctggccaaagccatatatggtcgtacttttacttggcttgtccagaagatc
aaccaatcactggcctttcaggacgaagtgtactacaccagcagatgctcctcggtaatc
ggacttctggacatctacggctttgaggtctttcaaagcaacagttttgaacagttctgt
atcaattactgcaacgagaagcttcagcagcttttcatcgaagtcacgctgaagagcgag
caagaggagtacgaggctgaaggcatcgggtgggagtcggtggaatacttcaacaacaaa
atcatctgtgacttggtggaggagaaattcaaaggcatcattgcgatcctggatgaagag
tgtttaaggccaggggacgccactgacatcaccttcctggagaagctcgaggacagtctg
ggaggccacgcccatttcatgacacataaactggccaatgggaagagtcgcaaggctgta
gggcgggaggagtttcggctgctacactatgccggagcggtcaactacaacgtgaatggg
ttcctggacaaaaataatgaccttctgtacaggaacctaaaagaggtgatgtgccagtct
aggaattcaatagtaaagcagtgtttccatccagatgaactgacagaccagaggagacca
gaaacggtaacacacacacacacacacacacacacacacacacacacacacacacacact
actactactactactctctctctctctctctctctctctctctctctgagccagcttttg
tgtttccaggctgctacccagtttaagctgagtttggccaagctaatggagattctgatg
tctaaggagccgtcatacgtccgctgcatcaaacccactgataccaaacaaccagaaagg
tttgaggaggtgttggtcagacaccaggtgaagtacctgggcttgatggagaatctgaga
gtaagaagagcaggatttgcatacagacgaagcttcgaggccttcctacaaaggtataaa
cctctgtgtccagacacttggccaaactggcagggaaaactatcagatggtgtctctacc
ctagtcaaacacctggactacaaaccagaggagtacaaactgggcaggtccaaaatcttc
atccgtttcccaaaaacactcttccggactgaggacgctctggagctcaagaaaccaacc
atcgctatcacattacagaaatgctggagaggctacagggaatgggccaaataccaacgc
atcagacatgcaacaatcacgatccagtcatggtggaggggggtcaaagggcgcaggaga
gccaaacgccgcagacaagcagtagacaccatccgcacgttaataaaaggcttcattctg
aggcacgagcctcgttgtcccgataacgagtatttcttggaccatgtacgcttctcatat
ctgatgaccatcaagaggaacctaccaaagagtgttctggacaggacttggccagtacca
ccaccgtcactcgaagaggcctcggtgtacatccaccgtctgtgtatacgcaacatggtg
aatgactactgcaggaaaatccaacccgagtggaagaaccagttggagcagaaggttgta
gccagtggtatgtttaggggtcagaaggacagctaccctcaaagtgtccctaggcttttt
gtgggcaccaggctggagaacgaagagatcaatctgaaagtgcgacagactctcggaagt
gaaaacaaagtgaagtatggtgtgccagtcatcaagtacgaccggcacggataccgtgcc
aggccgcggcagctgctgatgaccggctcctctgttgtccttgttcaggagtcgaaaatc
aagcagcgcattgactacggttcactgctgggcatctcagtcagttccctcagtgatggc
ttttttgtcctgcatgtgcccactgctgacagcaagcagaagggcgacctggtgctgcag
agtgaccacgtgatcgaggccgtcaccaaactggctgtcatgtcggacaagatacacgtc
gtcaacgtcagtcaggacagtattaggtttgcaatagcccggggcaaagagggcatcatt
gacttcacctgtggggcagaactacgagtggtcaaagccaagaatggacacctggctgtg
acggccccacgaatcaacagcagcgtatga
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integrated database retrieval system
