Ictalurus punctatus (channel catfish): 108259824
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Entry
108259824 CDS
T04658
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00061
Fatty acid biosynthesis
ipu00071
Fatty acid degradation
ipu01100
Metabolic pathways
ipu01212
Fatty acid metabolism
ipu03320
PPAR signaling pathway
ipu04146
Peroxisome
ipu04216
Ferroptosis
ipu04920
Adipocytokine signaling pathway
Module
ipu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108259824
00071 Fatty acid degradation
108259824
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108259824
09143 Cell growth and death
04216 Ferroptosis
108259824
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
108259824
03320 PPAR signaling pathway
108259824
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108259824
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108259824
Enzymes [BR:
ipu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108259824
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108259824
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of breast milk
108259824
Exosomal proteins of breast cancer cells
108259824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108259824
NCBI-ProteinID:
XP_053533139
UniProt:
A0A9F7QZ43
LinkDB
All DBs
Position
28:94544..107900
Genome browser
AA seq
670 aa
AA seq
DB search
MAECVRARSVSGNPEGPYRAVQCLDGLVQQEFEGMDTLDKLFRYAVGKFTHSPCIGSREV
LSLENETQPNGKVFQKLVLGQYKWKSYKEVDHLVNLLGSGLSALGQKSRSCIAIFCETRE
EWMITAQACFRFNYPLVTLYATLGEDAVAFGLSQCGATHLVTSKELLETKLKAVLPDVVD
LKHVIYAGSGSVSVENYPQSLSIHSLQEVMDLGDKPENLSVQCDAPSPSDLAVVMYTSGS
TGRPKGVMMHHSNLIAGMAGQCQRIPELGPEDSYVGYLPLAHVLELTAEISCLSHGCRIG
YSSPLTLSDQSSKIKQGCKGDCTVLKPTLIAAVPEIMDRIYKNVMSKVAQMNTLQRMLFN
MAYKYKVQQLEYGADTRIFNMMVFKRVSMLLGGCVRLMLCGGAPLSPDTHRFIKVCFCPI
GIGYGLTETCGAATISEFSDYSTGRVGAPLICSELKLRDWPEGRYTSQDKPHPRGEILLG
GPNVAMGYYGSEVEGDSGEFWVDEAGQRWFCTGDIGEVHPDGCLQIVDRKKDLVKLQAGE
YVSLARVEGALKNCPLIDNICVYADSNQNYVISFVVPNQKQLTELANRNGIEGKWEEICD
HATLEQEVLKAIKEVATTNKLQRFEVPMKVRLSSQAWTPETGLVTDAFKLKRKDLQTHYK
HDIERMYGAK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtgtgtgagagcgcgcagtgtgtcggggaatcctgaggggccgtaccgggcg
gtgcagtgtctggatggtctggtgcagcaggagtttgagggaatggacacgctggataaa
ctgttccgttacgcagtgggaaaattcacacactcgccctgtatagggagcagggaggtc
ctctcactggagaatgagacgcagcccaacggcaaagtcttccagaagctggtcctgggt
cagtataagtggaagtcatataaggaagtggatcatctagtgaacctcctgggcagtggc
ctgtctgctttgggtcagaagtcacgcagctgcatcgccatcttctgtgagacaagagag
gagtggatgatcacagcacaggcctgcttcagattcaactaccccttggtgacactctat
gctacactaggtgaagatgcagtggcatttgggctgagtcaatgtggagccacacacctt
gtcactagcaaggaactgctagaaaccaagctgaaggcggtgttgccagatgttgtggat
ctgaagcatgtgatctatgcgggcagtgggagtgtatctgtggaaaattacccacaatcc
ctcagcatccacagcttacaggaagtgatggatctcggagacaaacctgagaacttgagt
gtgcagtgtgatgctccctctccgtctgatcttgctgtagtgatgtacactagcggctcc
acgggtcgtcctaaaggagtgatgatgcaccacagtaacctcatcgcaggaatggctggc
caatgccagagaattccggaactcgggcctgaagactcatatgttggttatcttccattg
gctcatgtactggagctgactgccgaaatatcctgtctgagtcacggctgccggatcgga
tactcgtcaccactcacactctcagaccagtccagtaagataaagcaaggctgtaaggga
gactgcaccgtgctcaagcccacactgatcgctgctgtcccagagattatggaccgtatc
tataagaatgtgatgagtaaggtagcacagatgaacacacttcagaggatgctgttcaat
atggcctacaaatacaaagtgcagcagctggaatatggagcagatacacgcatatttaat
atgatggtgtttaagcgtgtatccatgttgctgggggggtgtgtgaggttgatgctctgt
ggtggtgctcctctctctcctgacacacaccgcttcattaaagtatgtttctgccccatt
ggcatcggttacggcctcacagagacctgcggggcggcaaccatctctgagttctctgat
tattccacaggacgtgtcggggcacctctcatctgctctgaactcaagctacgagactgg
cctgagggaagatacaccagtcaggacaagccccacccccgaggtgagattctgctaggt
gggccaaatgttgccatgggttactacgggagtgaggttgagggggacagtggggaattt
tgggtagacgaggcagggcagcgctggttctgtaccggtgacataggggaggtgcatcct
gacggctgcctgcagattgtcgaccgtaagaaggacttggtgaagctacaggcaggtgaa
tatgtgtctctggcaagggtggagggggcactgaagaactgtccgctaattgacaacatc
tgcgtctatgctgacagcaatcagaactacgtcatcagctttgtggtgcccaatcagaag
cagctgactgaactggccaataggaatggtattgagggcaagtgggaagagatctgtgat
catgccacactggaacaggaagtcctaaaagctattaaagaggttgcaacaacaaataag
ctgcagagatttgaggttcccatgaaggtgcgtctcagttctcaggcctggactccagag
acaggactcgtcactgatgcctttaagctgaagagaaaagatttacagacacactacaaa
catgacattgagaggatgtacggagccaaataa
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