Ictalurus punctatus (channel catfish): 108259854
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Entry
108259854 CDS
T04658
Name
(RefSeq) cone-rod homeobox protein
KO
K18490
homeobox protein OTX2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259854
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108259854
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
TF_Otx
Homeobox_KN
UPF0020
SatD
CPSF73-100_C
Motif
Other DBs
NCBI-GeneID:
108259854
NCBI-ProteinID:
XP_017315072
UniProt:
A0A2D0Q9U6
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Position
28:1887804..1891974
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AA seq
265 aa
AA seq
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MMSYMKQSQFGLTLPAPGMELLHTAASFPATPRKQRRERTTFTRTQLDILEALFTKTRYP
DIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQSSGQPKPRPPKKKATPPPPEMPS
DPSNISVVSPPPLPPPTLGSAPVSVWSPASLSPLPDPMCGSGTACMQRPYTMSYGPVSSS
YGTGFGSSPYFDCGPYLSPVTSQGALSPLAVSSVGTSLSQSPSLASQGYGVSASLGFDCL
DYKDQQAWKLGFSTIDCLDHKFQVL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctatatgaagcagtcacagttcggtttaacgctgccggctcccggtatggag
ctcctgcacaccgccgcctccttccccgcaaccccgagaaagcagcgtagagagcgtacc
accttcacccggactcagctggacattttagaagcattgttcacaaagacgcgctaccca
gacatcttcatgagggaggaggtggcactcaaaatcaacctgcctgagtccagagtacag
gtctggttcaagaaccgacgcgccaaatgccgtcaacagcagcaacagcagtctagcggc
cagcccaagcctcgccctccgaagaaaaaggccactcctcctccacccgagatgccctct
gatccctccaacatctcagtggtctcacctcctcctcttcctcctccaaccctagggtcc
gcccctgtgtccgtttggagccctgcctctctgtcacctctccctgaccctatgtgtggt
tcaggtaccgcgtgcatgcagcgtccatataccatgagctacgggccagtgtcatcctcc
tacggcacaggctttggctcgtcgccgtacttcgactgtggcccctacttgtcgcctgtt
acctctcagggagctctctcgccccttgctgtgtcctctgtaggcacgtcactcagccag
tcaccctcgcttgcctcgcagggctacggcgtctccgcctcgctcggcttcgactgcctc
gactacaaggaccagcaggcctggaagctcggcttcagcactatcgactgcctcgatcac
aagttccaggtgctgtaa
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