Ictalurus punctatus (channel catfish): 108259900
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Entry
108259900 CDS
T04658
Symbol
si:dkeyp-117b8.4
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108259900 (si:dkeyp-117b8.4)
04121 Ubiquitin system [BR:
ipu04121
]
108259900 (si:dkeyp-117b8.4)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
108259900 (si:dkeyp-117b8.4)
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108259900 (si:dkeyp-117b8.4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
ZBED1_RNase-like_helical
ZBED1_RNase-like
Motif
Other DBs
NCBI-GeneID:
108259900
NCBI-ProteinID:
XP_017315182
Ensembl:
ENSIPUG00000024050
UniProt:
A0A2D0Q911
LinkDB
All DBs
Position
28:5190938..5195146
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AA seq
891 aa
AA seq
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MEFPGRRRPGSLGTPTLRRRMDRVLPFSERRTSKVWDHYTQLSMHRVECNHCKRQLSFHN
STTSMREHLGRKHSIRDGAVPPPNTADVPNPSALHQHTATSALLNGRFPTSNAAVDVPTG
SFQPVVPVIVKEEQHEELSSDAAEAKHACTTFVPGSAGGVGTSNVNSIPSQDIEPTYRYS
PDELNTTVNNGAVCNNSGARGCSDKRAGLFTDLILEMVYRDLQPFSVVEERGFRLLLSCI
EPNYPVPSPSLLGNLLCHRYHVLKQCLQQHLQTGLAPRCLAICTEHWRSVEGCGVEGSGQ
FYLTVSAHFVDSNWQLARCVLDTRPIPEYKGNTTNSGPAKFAYTLKAVLSEFHLPESSVF
CVVYDTPWGMGCRRQGSMTTLDQDYQQEFPGPSHAPMQSLPEGWEPLLCAGEALKLCVQE
GLYVETVRQALADARGIVLHFQHDVNAAAALNQKAEAANKGAAWLVLDDPGRWATAIDMC
ERLLELKWVVSSVLEEQKAAPNLADHQWRLLHELVPVLRTVRIAASFLSEDINASISSLM
PCLQGVSRILGQNMTDCSCLVVRGVMERIRTGMEKRWRLTDEESLLDSPAVLSSFLDPRF
KEMRFLSPHARSKLHDKVKELLSVQAYTDDREVDQNIDRGLEVRENETGGEPAVLGLDDQ
LPIPTVASLDSPESCASCAEEGDSVELQQNENFVAVSSPEHINENLIVGSPSKATTGHKR
TANVAGLSSPLTCDRQLTARMRISPVPQSMYDILLGEDPTERMPEIQQQLENYIAEPLCK
RSLSPLHWWRNKEHRFPAVARLARKYLSIPATAIPADRAFAPRESPVTHRRAMLGPKHLD
QILFLHQNCDYVEQLKGGLSGHRESDHNSSLSGNQSRESLYQTLVSYDNKV
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccaggtcgaaggcggcctggtagtcttggaactccgactttgaggagaaga
atggatcgcgtgttaccgttctcagaacgtcgcacatccaaagtatgggaccactacacc
cagcttagtatgcaccgagttgagtgtaaccactgcaagaggcagctgtctttccacaac
agtaccacgtcgatgagggagcacttgggacgaaagcacagcattcgtgatggagcggtc
ccacctcccaacacggccgatgtcccaaacccctcagcattacaccaacacacggctacg
tccgccttacttaatggcagattcccaacgtctaatgcggctgtagatgttccgacaggg
tcgtttcagccggtagtacctgttattgtcaaagaggagcagcatgaagaactatcgtcc
gatgctgctgaggccaaacatgcctgcactacatttgttcctggttctgcaggaggagtt
ggcacttcaaatgttaattccattcccagccaggatatagaaccaacttacagatattcc
ccagatgagcttaacaccacggtcaacaacggtgctgtctgcaacaacagtggcgccaga
ggttgcagtgataagcgggcaggactcttcacagatcttatcttggagatggtgtacaga
gatctgcaacctttctcagtggtggaagagaggggattccgactcttgcttagttgcatt
gaacccaattatcctgttccatcaccttctttgcttgggaaccttctgtgtcatcgctac
cacgttctcaaacaatgccttcagcagcatcttcaaactggccttgctcctcgctgtctg
gccatttgtactgaacattggcgttctgtggaaggatgtggggttgaaggaagtggccag
ttctacctcaccgtcagtgcacattttgtggactctaactggcaactggcccgctgtgtt
ttagatactcgtccaataccagaatacaaaggcaacaccactaacagtgggcctgccaag
tttgcatacacattaaaagcagttctgtcagaattccaccttcctgagagttctgtgttc
tgtgttgtttatgacactccctggggtatggggtgcaggaggcagggaagcatgacgaca
cttgatcaggactatcaacaggaatttcctggacccagtcacgctcccatgcagtccctt
ccagagggctgggagccactgctttgtgcaggtgaagctctcaaactctgtgtccaggag
ggactttatgtagagactgtcagacaggcacttgcagatgctcgtgggatcgtcctacac
ttccaacatgatgttaatgctgcagcagctctaaatcagaaagcagaggctgccaacaaa
ggtgcggcatggctggtcctggatgacccaggccgctgggccacagccattgacatgtgt
gaaagactgcttgagcttaaatgggtggttagctcggtgctggaagagcaaaaggctgca
cctaatttggctgatcatcagtggcgtttattacatgaattggtgccggtgctacgaact
gtgcgcattgcagcatccttcctgagtgaagacatcaatgcttctatttcttccttgatg
ccatgcctccaaggtgtgtcccgaatcctggggcagaacatgactgactgtagctgtctt
gtggttaggggagtcatggaaaggatccgcactgggatggagaagcgctggagactgact
gatgaggaatctttgcttgacagtcctgctgtcttgtcatcattcctggacccaagattc
aaggagatgcgatttctcagcccacatgcccgcagcaagctgcatgacaaggtcaaagag
ctgttatctgttcaggcttacactgatgatagggaggtggaccagaatatagacaggggc
ttagaagtgagagagaatgagacaggaggggaacctgctgttttgggattggatgatcaa
ctgcctattcccacagtggcatcactggattcccctgaatcgtgtgcctcatgtgcggag
gagggagacagcgttgaacttcagcagaatgagaatttcgtagctgtctcatctccagaa
cacattaatgaaaatcttattgtgggttcaccttctaaagctacgactggacataaaaga
acagccaatgtggctggactgtcatctccactcacgtgtgatcggcagctcactgcccga
atgcgaataagccctgttcctcaaagtatgtacgacattcttctaggagaggatcctact
gagcgaatgcccgaaatccagcagcagttggagaattacattgcagagccgctgtgcaaa
cgtagcctctcgcctcttcactggtggcgtaacaaagagcatcgctttcccgcagtggcc
cgtcttgcacggaaatatctttcaattccagctactgctatccctgctgatcgtgctttt
gcaccgagggaatcacctgtgacccacaggagagctatgctcgggcccaaacatcttgac
caaatattgtttcttcatcagaactgtgattatgtagagcagcttaagggtggtctttca
ggacatagagagagtgaccataacagtagcctgagtgggaaccaaagtagagagagtctg
taccagactttagtgtcctatgataataaggtttaa
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