Ictalurus punctatus (channel catfish): 108259904
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Entry
108259904 CDS
T04658
Name
(RefSeq) non-POU domain-containing octamer-binding protein
KO
K13214
non-POU domain-containing octamer-binding protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108259904
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108259904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_occluded
RRM_7
PAS_7
Motif
Other DBs
NCBI-GeneID:
108259904
NCBI-ProteinID:
XP_017315188
Ensembl:
ENSIPUG00000018271
UniProt:
A0A2D0Q916
LinkDB
All DBs
Position
28:1588065..1592161
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AA seq
436 aa
AA seq
DB search
MQGNRGGRPDQHNHGPTRQPPNLQHDRRPPGTDSNGQHADGGEQPSPNAGLTIDLTNFKK
PGEKTYTQRSRLFVGNLPAGTSEEEVEKLFSKYGKPSEIFINKDRGFGFIRLETKTLADI
AKAELDDTMFRGRQIRVRFATHGASLAVKNLPQFISNELLEEAFSMFGPIERAIVIVDDR
GRPTGKGIVEFANKPSARKALDRCADGAFLLTSFPRPVTVEPMEQMDEDEGLPERLVSKN
PQYHKEREQPPRFAQPGSFEYEYAMRWKALMEMEKQQFEQVDRNIKEAQEKLEQEMEAAR
HEHQVILMRQDLLRRQEELRRMEEAHNQEVQKRKQLELRQEEERRRRDEELRAHTEELLR
RQQGAGANFAEKREQDMRMHMGGQGLPMNRTSLGGNPAPGGAPNMAANEGAGANAGGLPL
PFPRPGPPVDYKRRRF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggaacagaggaggccgtcctgaccagcacaaccatggcccgacgaggcagcca
ccgaatctgcagcacgacaggaggcctccaggaacggatagcaacgggcagcacgcggac
ggcggggagcaacccagccctaatgccggtctgaccatcgacctgacgaactttaagaag
cccggagagaagacgtacacgcagcgcagccggctgttcgtgggcaacctgcccgccggt
acctccgaagaggaagtggagaagctcttctccaaatatggcaaaccctccgagatcttc
atcaacaaggaccgaggctttgggttcatccgtctggaaacgaagacccttgcggacatc
gccaaagccgagctggacgacacgatgttccgcggccggcagatccgcgtgcgctttgcc
actcatggcgcttcgctcgcagtcaagaacctgccgcagtttatatccaacgagctgctg
gaggaggctttctccatgttcggccccatcgagcgcgccatcgtgatcgtggacgaccgt
ggccggcccacggggaagggcatcgtggaattcgccaacaagccctcggcccggaaagcc
ctggaccgctgtgctgacggagccttcctcctcacctcgtttcctcggcccgtgacggtg
gaacccatggagcagatggatgaagacgaaggacttccagagagactcgttagcaaaaac
ccacagtaccacaaggagcgcgagcagcccccgcgcttcgcccagcccggctcgttcgag
tacgagtacgccatgcgctggaaggctctgatggagatggagaagcagcagtttgagcag
gtggacaggaacatcaaggaggcgcaggagaagctggagcaggagatggaggcggccaga
cacgagcaccaggtcatcctcatgagacaggatctgttgaggaggcaggaggagctgagg
cgtatggaggaggcgcacaaccaggaggtgcagaagaggaagcagctggagctgcgccag
gaggaggagcggcgccgcagggacgaggagctcagggctcacaccgaggagctgctgagg
agacagcaaggcgctggagccaacttcgccgagaagagggagcaggacatgaggatgcac
atgggaggtcaaggccttcccatgaacaggacctccttgggaggaaaccctgcaccagga
ggagcgcccaacatggctgccaatgagggtgctggagcaaacgcaggtggacttcctctg
ccgttcccacgtcctggcccacctgttgactacaaacggcgccggttctga
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