Ictalurus punctatus (channel catfish): 108259912
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Entry
108259912 CDS
T04658
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20 isoform X1
KO
K11848
ubiquitin carboxyl-terminal hydrolase 20/33 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108259912
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108259912
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108259912
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108259912
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108259912
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
DUSP
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
108259912
NCBI-ProteinID:
XP_017315198
Ensembl:
ENSIPUG00000008278
UniProt:
W5UJY3
LinkDB
All DBs
Position
28:10348820..10375029
Genome browser
AA seq
912 aa
AA seq
DB search
MTDCGDVCPHLDSIGEVTKEELLHKSKGTCQSCGVGGPNLWACLQWDCPYVGCGESYSDH
STTHAQAKKHNLTVNLTTFRVWCYVCEREVFLEQRPVSPVAATQRYKPLEQDSSPQNARH
PLKAVPIAVADDEGSESEEDEFKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFLDCS
GLVRTDKKPALCKSYQKLISELWHKKRPSYVVPTSLFHGIKLVNPMFRGYAQQDTQEFLR
CLMDQLHEELKEPFIDCSNSITDNDSESNHDNQNHADGDRSPSEDDFLSCDSGSGSERGD
GDRAGGETELLIQDECSGARESGGISEKEKLKERRREDQGEERTPEMDEDADVDTAVQEE
QNERGGEQMGTSRAQGNTEPDNEVSMHHPCSRPCSPTHSVQEFHSKLSSSPSRSSPLRAS
PAYAFKKAQMLLGTKKKKQSRFRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPI
PGKEDLAKLHSSIHQGTPAKMGVCTDTYAAQGWLSYIMESIRRFVVSCIPSWFWGPMVTL
EDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLQLPEILCIHLKRFRHEVMYSFKI
SSHVSFPLEGLDLQPFLAKDSPSQITTYDLLSVICHHGTAGSGHYIAYCQNVINGQWYEF
DDQYVTEVHETVVQNAEAYVLFYRKSSEESVRERQKVIALANLKEPSLLQFYISREWLNK
FNTFTEPGPITNHTFLCQHGGIPPTKYHYVDDLVVILPQNVWEYLYNRFGGGPAVNHLYV
CTICQVEIEALAKRRKTEIDTFIKLNKEFQAEEAPTVILCISMQWFREWENFVKGKDNEP
PGPIDNSKIAVMKGGHAQLKHGADYGQISEETWQYLLGIYGGGPEIAVRQSVSTLESDTH
GERKIEAETRAL
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgacagactgtggagacgtttgtcctcacctggactccataggtgaagtgaccaaggag
gaacttctgcacaaatcaaagggcacctgtcaatcatgtggggtaggtggtcccaacctc
tgggcatgtcttcagtgggactgtccctatgtgggctgcggagagtcgtactcggaccac
agcaccacacatgcacaggcgaagaaacacaatctgacagtgaatctgactacgttcagg
gtatggtgttatgtatgcgagagagaggtgtttctggaacagaggcctgtaagcccagtg
gcagcaactcaacgctacaaacctctcgaacaggattcttctccccagaatgcacgtcac
ccgttaaaggcagtgccgattgctgtggcggatgatgaaggttcggagtctgaggaagat
gagtttaagcccagaggcctcacggggatgaagaacattggaaattcgtgttacatgaac
gcagcattgcaggccctctcaaactgtcctcctttgactcagtttttcctggactgcagt
gggctggtgcgcacagacaagaaacctgcactgtgcaaaagctatcagaaactcatctct
gagctctggcataaaaaaagacccagttacgtggtccccactagtctgtttcatggcatt
aaactggtgaatcctatgtttcgaggctatgcgcaacaggatactcaggagttcctgcgc
tgtctgatggatcagctgcatgaggaactgaaggagcctttcattgactgcagcaactcc
atcactgataatgactcagagagcaaccacgacaatcagaaccatgccgacggagaccgt
agcccctccgaggatgacttcctgtcatgtgactcgggttcggggagtgagagaggtgac
ggagatagagcaggaggtgaaaccgagcttcttattcaggatgagtgctcaggagcaagg
gagagcggcgggatctctgagaaagagaagctgaaggagagacgaagggaggaccaagga
gaggagagaacaccagagatggatgaggatgctgatgtggacacggcagtgcaggaggag
cagaacgaaagaggtggagagcagatggggaccagcagagctcagggaaatacagaacca
gacaacgaggtgtccatgcatcacccgtgctctcgtccctgtagccccactcacagcgtg
caggaatttcattcaaaactgtcaagcagcccatccaggtccagccctctacgggccagc
cccgcctatgccttcaagaaagctcagatgctcctgggcaccaagaagaagaagcagtct
cggttccggagcgttatttccgacatctttgacggctccattctgagcctggtccagtgt
ttgacgtgtgaccgggtgtcaacaacagtcgagacctttcaggatttgtctctgccaatt
ccaggtaaagaagacctggctaaactccactcctccatccaccagggcactccagccaag
atgggtgtgtgcacagacacctatgctgcccagggctggctctcctacattatggagtcg
atacgcaggtttgtagtgtcatgtatccccagctggttttggggtcccatggtgacactg
gaggactgcctcgctgccttctttgctgcagatgagctgaaaggggataacatgtacagc
tgtgaacgatgtaaaaagttgagaaatggtgtgaaatattgtaaagtcctacaactccca
gagattttgtgcattcacttgaagcgtttccggcatgaggtgatgtactcctttaagatc
agcagccacgtgtctttccctctggagggtttggacctgcagcccttcttggccaaagac
agcccttctcagattactacttatgatctcctatctgtcatctgccaccacggcacagct
ggaagtggccactacatagcatattgtcagaacgttatcaatggccagtggtacgagttt
gatgatcagtatgtaacggaggtccatgagacggtcgtgcagaacgcagaggcctatgtc
cttttttacaggaagagcagtgaggaatctgtaagagaacggcagaaagtcatagctctg
gctaatctgaaggaacccagccttttacaattttacatttccagagaatggctcaacaag
ttcaacacatttaccgaaccaggacccatcactaatcataccttcctgtgtcagcatgga
ggaatccctcctaccaaatatcactatgtggatgatctggtggtgattctgcctcagaat
gtgtgggaatacctttacaacaggtttggaggaggtccagctgtaaatcatctttatgtg
tgcactatctgccaagtggagattgaggccttagccaaacgcaggaaaactgagattgac
accttcatcaagctcaataaggagttccaggctgaggaggctccaacagttatattgtgt
atcagcatgcagtggttcagagagtgggagaactttgtcaagggtaaagacaatgagcct
ccaggcccaattgacaacagcaagattgcagtgatgaaggggggacatgcacagttaaaa
cacggggctgactatgggcaaatctcagaggagacatggcagtacttgttgggaatttat
ggtggcggtcctgagattgcggtgaggcagagcgtcagtactcttgaatcagacacacat
ggcgagaggaagattgaggcagaaactagagcactctga
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