Ictalurus punctatus (channel catfish): 108259943
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Entry
108259943 CDS
T04658
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108259943 (arhgef28a)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108259943 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
C1_2
PH_13
Ank_2
Motif
Other DBs
NCBI-GeneID:
108259943
NCBI-ProteinID:
XP_017315254
Ensembl:
ENSIPUG00000005745
UniProt:
A0A2D0QAD8
LinkDB
All DBs
Position
28:complement(7289479..7412906)
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AA seq
1789 aa
AA seq
DB search
MELNRDEVPVYGQVEVYAVLQDTQSIQEKAEYYVLLKGSHIHHVTKAQRKEKCHLLSFII
PGHNVAEKVSVRLYSWEDGNRCSQPAPMSEELSLEYKWDTVQEVADLLISDPDNLTSSMH
VDIQRKFCLVESIQPGQNSLDVNEQHGTSRLDENLGLDQRLKLKTESGKHNPEENPGCWE
PDPGGCKLEPCSAIDVKITQAVSNMYSLLEWNNQKTQESQAPRQMETPLHIAVRLGLYHL
TLFYLQQSGGQEMATLPNEEGHTPTELAQSRGHAATISALANLSACSEESPVWMSQIWAD
ESHLLRLCPLTTSFILTVKNRINFDPQRSIQLYREKHRYLESHMQEVVLTEVEGKSRQNQ
TDDTSEGDLTSWTNIEDCVLLESVFEEQLVLSLDEDEENPTTYNSEKSCSPPGFSSPFQL
QSTDITAARLTAMLNRTGKNDDHRKYIATVPNNSSATDPQPAVKVEGTREQRPFSHPFLP
SFTQFSPTSSAGLVLDRFLRGSSHSEHNNHSASSPPESYEISPSLVALEMDSEEEDDDLL
MKKPLPQISSENKDNGDKQDRFNPSSGLSCTRCHSASSDCNHASQKDSADQGVRLRSYSY
SSPKISLLSPRSSRDTPRPPADLSHDGVFTNNSNGSRSLLQALSLSKSLSLLNPVKQRAL
SLTEQPQEKRELRFRRRTQSADDESSVELADSLQHLTLSEFLKEIEEEGWDKYIIPSKTE
PEKYKVSRTFSFIKSRMYSTRSKKGKAKEKEVKEKQGSGHQFAAGPVLGTSVCEVCDKPV
SGKETLHCTNCAVCIHKGCKDSAAQCLKKVQDKYAVSRMKARAATLPQNFVLRESIPSSQ
ISTSASLPVVTQRDRRDTTPLPCPISRSVPLVPEWLAESPEGDTEFSSWRSHGQSEELLQ
TMESSTSTDSSLVEETVDAPLQNSFGTDTLYLEAESWSLAVETQFCQNQEKRTIKRQDVI
YELMQTELHHLQTLTIMAEVFRRGMREEVGLDAEAIGRIFPCLDELLVLHRDFLSAMTER
RNNSTQPDNEKNYLIHHVGDILLQQFSQENAENMKRVYGEFCSRHIEAVSFFKELQQQNK
RFQLFIKQQSSNLLVKRREIPECILLVTQRITKYPVLLERILQYTEEGTQEHSDISGALS
LVRELISAVDLRVSEREQSQWLSDVLGRMESKSLARLKSGAAFRKHDMTNGRTLLHHGPL
LWKTATGRLKDVLALLLTDLLIFLQEKDQKYIFATVDQKCPVISLQKLIVREVANEERGM
FLISASSSGPEMYEVHAATKDERKAWMRLIREAVEICHEKEEVTASESEEERSAAEAKNQ
RIQKLQESLCSHDQLICSSLEEKLHIYAELAAMVGHRDISPEPKLLVCPNTEELPNAAVL
LNAALKEAENLKEALSFHCNSTSRPGPLPVSEEQKTSDTTTQLEATLPAPSPPPVPAEEE
PQAADAVRSEEEELREDSLELQLRNQSSTTDNHNMYLKVCQSIQSLTQLLYSLQAVVTIQ
DSRYEVRRLLLLLLSSSAHQRISQGSLQEQERQREAERRRQDLARAARERQRWARECQAQ
HLRYEERESELAQREQRCHEEVQRLQRQREELEEQQQEYQQSLERLREGQRSVERERERL
EMQQRMMGKWRHERQHNLPVTSIKLEAHQGSGDETKNFHHGHHSGLDEDGSIFVNEAAFL
ATSMNNRRLHHYQHQYQHNTHLHPGYVNSPSAQNSLNSLLALSNHTHPTISTQDELWTED
VGPAIHSTRTAGAVGPGIYQGDALLVPQAFVSMETENQDPDGEEKIVYL
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaacagagatgaggtccctgtttatggtcaggtggaagtgtatgcagtgctg
caggatacacagtctattcaggaaaaggctgagtactatgtgttattaaaaggctcgcat
atccaccatgtcaccaaagctcagaggaaggagaagtgccatttactgagcttcatcata
cctggtcacaatgttgcagaaaaggtctcggtgcggttgtactcctgggaagatggcaac
agatgcagtcaaccagccccgatgtcagaggaactctcattggagtacaaatgggacact
gtacaggaagtggctgatctgctcatatctgaccctgataaccttacttccagcatgcat
gtggacatccagaggaaattttgtctagtagagagtatccagccagggcagaacagttta
gatgtgaatgaacagcatgggacctcgagactagatgaaaatttaggacttgaccaaaga
cttaagctaaaaactgaatcagggaaacacaatccagaagaaaatcctggatgttgggag
cctgatcctggtggatgcaaactggagccatgtagtgcaattgatgtgaaaatcacacag
gcagtttcaaacatgtactctcttctggagtggaacaaccaaaagacacaggaatcacaa
gctccccgccaaatggagacacctttgcacatagctgtgcgtttgggtctgtatcacctc
accctcttctatcttcaacagtctgggggtcaggagatggcaacactgcccaatgaggaa
ggacacactcctactgaactggcccaaagtagaggccatgcagcaaccataagtgcatta
gctaacctttcagcttgtagcgaggagagcccagtgtggatgtcacaaatctgggctgat
gaatcacaccttctcagattgtgcccgctaaccacttccttcatcctgacagtcaaaaac
agaattaattttgatccacagaggagcatccaactctatagggaaaaacacagatatcta
gaaagccacatgcaggaggttgtactcactgaggtggaagggaaaagcagacagaaccag
acagatgacacaagtgaaggagatctcacaagctggacaaacatagaggattgtgttctg
ctggagagtgtttttgaagaacagcttgtcctttctctggatgaagacgaagagaatccc
accacatataattcagagaaatcgtgctcccctccaggtttcagctctccattccagctt
cagtctacagacatcactgctgccagactcacagccatgctcaaccgcactggcaagaat
gatgaccataggaaatacattgccacagtaccaaataacagctctgccactgacccgcaa
cctgctgtcaaggtcgaagggacgagagagcaacgcccgttctctcatcctttcttgcca
tctttcactcagttctcccccacatcttcagcaggactggtcttggaccggtttcttcgc
ggcagcagccacagtgaacacaacaatcacagtgcaagttcacctccagaatcatatgaa
attagcccaagtctcgtggccttggaaatggacagcgaagaggaggatgatgacttactt
atgaagaagcccctcccccagatatcatctgaaaataaggacaacggagataaacaggac
cgctttaatccatcctcgggcctcagctgcactcgctgtcactctgcttcctctgactgt
aaccatgcctcccaaaaggactctgcagatcagggagtgcgtctccgttcatattcttat
tcgtcacccaaaatcagcctgctgtccccccgctccagccgagacacccctcgtcctcct
gctgacctcagccacgatggcgtcttcaccaacaacagcaatggcagcagatctctccta
caggctctgtctctgtctaaatctctgtctctgctcaatcctgttaaacagcgagcactg
agcttaactgagcaaccgcaagagaaaagggagttaaggttccgtagacgcactcagtca
gctgatgacgagtccagcgtcgagctggccgattcgctccaacacctcacgctctccgaa
ttcctcaaagaaattgaagaagagggatgggataaatacattattccttccaagactgag
cctgagaaatacaaagtcagccgcaccttcagtttcattaaaagccgaatgtacagtaca
cgcagcaagaagggaaaagcgaaggagaaggaagtgaaagaaaaacagggcagcggacac
caatttgcagcaggtcctgttctggggacttcggtttgtgaggtgtgtgacaaacctgtt
tcagggaaggaaactctgcactgcaccaattgtgctgtgtgcatccataagggttgtaaa
gattctgctgcacagtgcctcaagaaagtgcaggacaaatacgcagtttctaggatgaag
gccagagcagccacccttcctcaaaattttgtattgcgcgaaagcatcccgtcctctcag
atatctacttcagcctccctccctgtggtgactcaacgggacaggagagacactacccct
ctgccatgcccaatatcaaggagtgtccccctagtcccagagtggcttgcagagagccca
gagggagacactgagttctcctcctggagatctcatggacagtcagaggagctcctgcag
accatggaatcttccacttccactgactcctcgctcgttgaagaaacagtggacgctcct
ctacagaacagttttgggacggacactctgtatttggaggcagagtcttggagtctagcg
gtggagactcagttctgccaaaatcaggaaaaacgcacaatcaagagacaggatgtcatc
tatgagctaatgcagacggagctacaccatctgcaaacgctgaccatcatggcggaggtg
tttaggcgaggcatgcgggaggaggtgggcttggatgcggaggctattggtcggattttc
ccgtgcttggacgagctcctcgtcctgcaccgagactttctttctgccatgacggagcgc
cggaataactccacgcagcctgacaatgagaaaaactacctcattcaccatgtgggtgat
atcctcctgcaacagttctctcaggagaatgctgagaatatgaagagggtctatggggag
ttctgcagccgtcacattgaagcagtcagcttcttcaaggagcttcagcagcagaacaaa
agatttcaactctttattaaacaacagagcagcaacttactggtaaagaggcgagagatc
ccagaatgcattttgttagtgactcaacgaattacaaagtatccagtgcttttagagagg
atactgcagtacacagaagagggcacgcaggagcattcagatatctctggcgcgctatct
ctggtgcgagagttgatttcagcagtggatttgcgagtgagtgagcgggagcagagtcaa
tggctgagcgatgtgcttggccgcatggaaagcaagagcttagccagactgaagagtggt
gctgcctttcgtaagcacgacatgaccaatggccgaacactgcttcatcatggcccgttg
ctttggaagactgccaccggcagactcaaagatgtgctggccctcctgctgactgatctg
ctgatattcctccaggagaaggaccagaaatatatctttgctactgttgaccagaaatgt
ccagtgatctccctgcaaaagttgatcgtgagggaggtggctaatgaggagaggggtatg
tttctaatcagtgcctcgtccagtggtcccgagatgtacgaggtgcacgcagcgaccaaa
gacgagcgaaaagcctggatgaggcttatccgagaagcagtggagatttgccatgagaag
gaggaggtcactgcaagtgagtcggaagaagagaggagtgcagcagaggccaagaaccag
agaattcagaagctccaggagtctctctgtagtcatgatcagctgatctgctccagcctg
gaggagaagcttcacatctacgctgagctcgctgccatggtgggccacagagacatcagc
ccagaaccaaagctgttggtatgccccaacacagaagagctccctaatgctgctgttctt
ctcaatgctgcacttaaagaggcggagaatctaaaagaagcactgtcatttcactgcaac
tccacctcccgtccaggtcctctgcctgtgtctgaggaacagaagacttctgacaccacc
actcagcttgaggcaactcttcctgctccatctcctcctccagtgcctgctgaagaagaa
cctcaagcagcggatgctgtgaggagcgaggaagaggagttgagagaagacagccttgaa
ctccagcttcggaatcagagcagcacaactgacaatcataatatgtaccttaaggtgtgt
cagagcatccagagtttgactcagctgctttacagtctgcaggctgtagtcaccatccag
gacagccgctatgaagtgcgccgtctccttctcctcctcctctcaagttctgcccaccaa
cggatctcccagggttccctgcaggagcaggagcgtcagcgggaggcagagcgtcggcga
caggatctggcacgggcagcccgggaacggcagcggtgggcacgcgagtgccaggcacag
catctgcgttacgaagagcgggaaagcgagctcgcacagcgggagcaacggtgtcatgag
gaggtccagagattgcagcgccaacgcgaggagctggaagagcagcagcaggagtaccag
cagagcctggagaggctgagagagggacagcggagtgtggagagagagagggagaggctg
gaaatgcagcagaggatgatgggaaaatggaggcatgaacgccaacacaacctacctgtt
acgagcatcaagctggaagctcaccaagggtcaggggatgaaacaaaaaacttccatcac
ggtcatcatagtggcttggatgaagatgggtccatttttgtaaatgaagcagcttttctg
gctacatccatgaataatcggcgtcttcatcactaccagcatcaatatcagcacaacact
cacctacatccaggctacgtgaattcccccagtgcccagaacagtctgaattctctgctg
gctttgtccaatcatacacaccccacaatcagcacccaagatgagctatggactgaagat
gttggtccagcaatccattctaccaggacagcaggggcggtgggtccagggatttatcaa
ggtgatgccctcttggtgccgcaggcttttgtttccatggaaacagagaaccaagatccc
gatggagaggagaaaatcgtctatctctaa
DBGET
integrated database retrieval system
