Ictalurus punctatus (channel catfish): 108259963
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Entry
108259963 CDS
T04658
Symbol
f11r.1
Name
(RefSeq) F11 receptor, tandem duplicate 1
KO
K06089
junctional adhesion molecule 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecule (CAM) interaction
ipu04517
IgSF CAM signaling
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
108259963 (f11r.1)
04517 IgSF CAM signaling
108259963 (f11r.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108259963 (f11r.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108259963 (f11r.1)
04090 CD molecules [BR:
ipu04090
]
108259963 (f11r.1)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
CTX family
108259963 (f11r.1)
CD molecules [BR:
ipu04090
]
Proteins
108259963 (f11r.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
Ig_2
Ig_C17orf99
VEGFR1-3_N_Ig-like
C2-set_2
C1-set
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
108259963
NCBI-ProteinID:
XP_017315310
Ensembl:
ENSIPUG00000009630
UniProt:
A0A2D0QD62
LinkDB
All DBs
Position
28:complement(11475686..11487556)
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AA seq
292 aa
AA seq
DB search
MFLVFVLLCWQATGLHAFSASSSTPTVRVPENSGADLKCDYSADFGATPRVEWKFSSITG
SQSFIYFDGQITDKYKGRMTQYQGGLRIEKATRQDTGDYSCEVSGNSGYAEVKIKLTVLV
PPSVPISRIPTSATTGRSVLLTCFDKDGSPPSTYKWYKNGTPLPDDPSKFPNFKNLTYKL
NSLNGNLEFPSVSKADSGSYYCEASNGQGPPQRGPAVVMEVRDLNTGGIVAGVLVALLAI
ALLCFAVWFANKKGYLPKMSESKPKTAVYTQPRQDYGDEDDGEFKQKQSFVV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgttcttggtgtttgtgcttctctgctggcaagcaacaggcctgcatgccttttctgcc
agctcgagtacaccgaccgttagggtcccggagaacagtggagccgatctgaaatgtgac
tactcggctgattttggggcaacacctcgagtggaatggaaatttagtagtataacgggc
tcgcagtccttcatctactttgatggccagattacagataagtataaaggacggatgact
cagtaccaaggcggtttgaggattgaaaaagccaccagacaagacactggcgattattcc
tgtgaagtgtccggtaatagtggctatgctgaagttaagattaaactaaccgtgctcgtt
cctccttctgtgccgatcagccgcatccccacctcggccacaacaggtcgcagcgtccta
ctgacctgtttcgataaggatggttctcctccgtctacctataaatggtataaaaatggc
acccctttgcctgatgaccccagcaagttccccaactttaagaacttgacatacaagctg
aacagtctgaacggcaacctggagtttcccagtgtgagtaaggcagacagcggaagttat
tactgtgaagcttccaatgggcaggggcctcctcagcgtggaccagctgtggtcatggaa
gtccgtgacttgaacacaggaggtattgtggccggcgttcttgtagcactgcttgctatt
gcgttgctttgctttgctgtgtggttcgccaataagaagggatatctgcccaaaatgtcc
gaaagcaagcccaaaacagcggtgtatacacagcctagacaggactatggtgatgaggat
gatggggagttcaaacagaagcagtccttcgtggtgtag
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