Ictalurus punctatus (channel catfish): 108259994
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Entry
108259994 CDS
T04658
Name
(RefSeq) protein AATF isoform X1
KO
K14782
protein AATF/BFR2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108259994
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
90S particles
Other 90S particles
108259994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AATF-Che1
TRAUB
Motif
Other DBs
NCBI-GeneID:
108259994
NCBI-ProteinID:
XP_017315375
Ensembl:
ENSIPUG00000022311
UniProt:
A0A2D0QDC7
LinkDB
All DBs
Position
28:complement(3237670..3251315)
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AA seq
553 aa
AA seq
DB search
MAASISEQLADLLNPLPNFADPEDDQDDETKARVVDKFDEGGDDDDDLPASGLRKRTAAL
LADSDKRYRGRVTSRKELEQELDGSADDDDDDDEDIEDRQLDKEMELDDDDDEEEEEDDE
DEDIGDDDGSHMSSLVSKMKGTDLSFPKETDFRKLTEGMDDLEESESEDEGETEDDSEEE
DEEDDDKEDVGDSGDVMTFSKEKVDEEVEKGKAVKNQLALWDLMLEGRIKMQKALVTANQ
LPQPDTFPEFKSKGGAEYAGALKNSHKALKALQRSLLELQDLLLYQNPETRAISQGKTWG
QDISSKSEEDEEVESDEGENEDDGDEEEKRPAGRSGPSKRKLETTQYPDFMAKRFAAFQP
YRDATLQKWYDKTRLTTGKNNKGFGAFERNILTQVEQVLMDKERLLKRTQTRRSDYRVLG
KPELSAVTTQSRSTEPEAAEPVLKANAHLKDLDEEIFDDDDFYHQLLRELIERKTSAADP
NDQVAMGRQWLAIQKLRSKIKKKVDTKASKGRKVRFHVHSKLMNFMAPIDHSTMGDEARS
ELYRSLFGSQMLQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccatatcggagcaactcgcggatttgttgaacccgctgccgaatttcgca
gaccccgaggacgaccaggatgacgagaccaaagccagagtcgtagacaagtttgatgag
ggaggcgatgatgatgatgatctcccagccagtggactgcggaagcgaacagctgctttg
ttggcagattcggataaacgctatcgtggcagagtgacgtcgcgcaaggagcttgagcag
gagcttgatggctctgctgatgacgacgatgatgatgatgaagacatcgaagatagacag
ctggataaagagatggaacttgatgatgatgatgatgaggaggaggaggaggatgacgag
gatgaagatatcggtgatgatgacggttcacacatgtccagcttggtgtcgaagatgaag
ggcactgacttgagcttcccaaaagagacagacttccgcaagctcacggagggcatggac
gacctggaggagagtgagagtgaggatgaaggggagaccgaggatgactcggaagaggaa
gatgaggaggacgacgacaaagaagacgtcggcgactcgggagatgtgatgaccttctcg
aaggagaaggtggatgaagaggtggagaaaggcaaagcagtgaagaatcagctcgctctt
tgggacctgatgctcgaaggacgaattaaaatgcagaaagccctcgtgacggccaatcag
cttcctcagcccgacacgttccccgagttcaagagcaaaggcggggccgagtacgccggc
gcactgaagaacagccacaaagctctgaaggctctccagagatctttattagagctgcag
gacctgctgctgtatcagaacccagaaaccagagccatctcgcaggggaagacatgggga
caagacatcagcagcaagtccgaggaagatgaagaggtcgagagcgatgagggtgaaaac
gaggacgatggcgacgaggaggaaaagcggcccgcaggtcgaagcggaccctccaagcgg
aagctggagacgacgcagtatcctgacttcatggctaagcgctttgcggccttccagccg
taccgcgacgccacgctgcagaaatggtacgacaagacgcggctcaccacgggcaagaac
aacaagggcttcggcgcgtttgagcggaacatcctgacgcaggtggagcaggtgctgatg
gataaggagcgcctgctgaagcgtacacagacacgcaggtctgactacagagtgctgggc
aaaccggagctcagcgccgtcaccacgcagtcccgcagcacagagcctgaggccgccgag
ccagtgctcaaagctaacgcacatctcaaagatctggacgaggagatcttcgacgatgac
gacttttatcaccagcttcttcgagagctgatcgagcgaaaaactagtgcagctgatcct
aatgatcaagtggctatgggcaggcagtggctggccatccagaagcttcgcagcaagatc
aagaagaaagtggacacgaaggcgagtaagggcaggaaagtccgattccatgtacacagt
aagctgatgaattttatggctcctattgaccacagtaccatgggtgatgaagctcggtcc
gagctgtaccgatctctgtttggatcccagatgcttcagtga
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