Ictalurus punctatus (channel catfish): 108259999
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Entry
108259999 CDS
T04658
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108259999
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
108259999
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
108259999
NCBI-ProteinID:
XP_017315383
Ensembl:
ENSIPUG00000016851
UniProt:
A0A2D0Q9L6
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Position
28:15678223..15693420
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AA seq
512 aa
AA seq
DB search
MNGMPSTTVIQITNLSSSVTSEQMRTLFGFLGDIEELRLYPPDHTPLSFSSKVCYIKYQE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAAPVPSLMPGGGLLPIPS
PAPLQNQLGLPLAARAPLHLGLDSPLSAISSQPPIMGNVDPSKIDEIRRTVYVGNLNSQT
TTADQLLEFFRQVGEVKFVRMAGDETQPTRFAFVEFANQDCVARALAFNGVMFGDRPLKI
NHSNNAIVKPPELTPQAAAKELEDVMKRVREAQSTIAAAIEPVEDKKRSSSRSRRSRKSH
SRSRSHSRSRSQRKRSRSRHGGRPSQSAWRRTADSHKRHSRDRRYSRSHSRERRKDRDGK
MRRGADADDRRRDKKGRMPFKGYRGSSRSPSNSRGHRKRSKSRSRSVRKKARSPSPKRGK
KDRRREPGRDSGREWRARSTSRRRSRDSDRQKSKAKSKQMESGYKQKEQDYESDGEDMGG
SGVSEDFSPHAHHNGEYSSMHADEGEDFSRAE
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggatgccgagtaccacggtaattcagattaccaacctgtcctcgtctgtcact
agcgaacaaatgcgaactctcttcggcttcctcggagatatcgaggagttgcggctctac
cctccagaccacacgccactttccttctcatccaaagtgtgttacataaagtaccaggag
ccgagtagtgttggtgtggcccagcatttaaccaatactgtgtttattgacagagctcta
attgttgtgccatgtgcagaaggaaagatcccagaggaagccaaggctctgtcccttctg
gcacccgcagccccagtgcccagtttgatgcccggcggaggactgctgcccatccccagc
cctgccccgctgcagaaccagttgggtttgccgctggcagcacgggccccactgcacctc
gggctcgactcgccgctgagcgccatctcctctcaaccccccatcatgggcaacgtggac
ccttccaaaatcgacgagatccgcaggacggtgtatgtcggcaatctcaattctcagacc
accacggcagaccagctgctggagttcttcaggcaggtcggcgaggtgaagtttgtgcgc
atggcaggagacgagactcagccgacgcgctttgccttcgtggagtttgccaaccaggac
tgtgtggctcgagcgctcgctttcaacggagtcatgtttggggacagacctttaaagatc
aaccattccaacaacgccattgtgaagcctccggagctgactcctcaggctgctgctaaa
gaactggaggacgtgatgaagcgcgtgagagaggctcagtccaccatagcggcagccatc
gagccagtagaggacaaaaagcgctcctccagcagatccaggagatcaagaaagtcccat
tccagatctcgctctcattcccgttctcgctcgcaacggaaacgctcccgatccagacac
gggggccggccgtctcagagcgcgtggaggaggacggctgactcgcacaagagacactcc
agagacaggagatatagccgctcacactccagagaaaggcggaaagacagggatgggaag
atgaggaggggggctgatgctgacgataggagaagggacaaaaagggaagaatgcctttt
aaaggttacagaggatcctcgagatcccccagcaacagcaggggacacaggaagaggagc
aaatcacgctccagatctgtaaggaagaaagcaaggtctccatcaccaaaaagaggaaag
aaagaccggaggagagaacctgggcgggacagcggtagggagtggagagcgagatcaaca
tcccggaggaggagcagagactcggacaggcagaagagcaaagccaagtccaaacagatg
gagagcgggtacaagcagaaggaacaggactacgagagcgatggtgaagacatgggcgga
tcaggtgtcagcgaagacttttctcctcacgcccatcacaacggcgagtacagcagcatg
cacgcagacgagggcgaggacttctccagagctgagtaa
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