KEGG   Ictalurus punctatus (channel catfish): 108260007
Entry
108260007         CDS       T04658                                 
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
  KO
K08583  calpain, small subunit 1
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ipu01002]
    108260007 (capns1a)
Peptidases and inhibitors [BR:ipu01002]
 Cysteine peptidases
  Family C2: calpain family
   108260007 (capns1a)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_5 CAPN13-like_C_EFh EF-hand_FSTL1
Other DBs
NCBI-GeneID: 108260007
NCBI-ProteinID: XP_017315398
Ensembl: ENSIPUG00000018683
UniProt: A0A2D0Q9N0
LinkDB
Position
28:1722194..1729558
AA seq 216 aa
MFLAKKLIGGLIDVVSNIDPGQFVPSEPPPARRPLAYVQANENDEERQFRKVFQQLAGDD
MEVSPTELMNILNKIISKRGDLKTDGFSIESCRSMVAVMDSDSTGRLGFEEFKYLWNNIK
KWQGIYKQFDADQSGMIGADELPKAFQAAGFPLNDQLFQLIIRRYSDEKGNMDFDNYIGC
LVRLDAMCRAFKTLDKDGNGTIKVNIKEWLQLTMYS
NT seq 651 nt   +upstreamnt  +downstreamnt
atgtttctggcgaagaagctgattggtggactcatcgatgtggtcagcaacatcgatccc
ggccagttcgtgccctccgaacctcctcctgctcgcagaccattggcgtacgtccaggct
aacgagaacgatgaggagcgacagttccgtaaagtgttccagcagctcgctggcgatgac
atggaggtgagccccactgagctgatgaacatcctcaacaaaatcatctccaaacgtggc
gacctgaagacagatggcttctctatcgagtcctgcaggagtatggtggccgtcatggac
agcgacagcacaggcagactggggttcgaagagttcaaatacctctggaacaacatcaag
aagtggcagggcatctataagcagtttgatgctgatcagtccggcatgatcggcgcagac
gagctgcccaaagcattccaagctgcaggcttccccctgaacgaccagctcttccagctg
atcatccgcaggtacagcgacgagaagggcaacatggacttcgataactacatcggctgc
ctggtccgtctggacgccatgtgccgtgcttttaagacgctggacaaagacggcaacggc
accatcaaagtcaacatcaaagagtggctgcagctgaccatgtactcctga

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