Ictalurus punctatus (channel catfish): 108260007
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Entry
108260007 CDS
T04658
Symbol
capns1a
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108260007 (capns1a)
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C2: calpain family
108260007 (capns1a)
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GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
EF-hand_FSTL1
Motif
Other DBs
NCBI-GeneID:
108260007
NCBI-ProteinID:
XP_017315398
Ensembl:
ENSIPUG00000018683
UniProt:
A0A2D0Q9N0
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All DBs
Position
28:1722194..1729558
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AA seq
216 aa
AA seq
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MFLAKKLIGGLIDVVSNIDPGQFVPSEPPPARRPLAYVQANENDEERQFRKVFQQLAGDD
MEVSPTELMNILNKIISKRGDLKTDGFSIESCRSMVAVMDSDSTGRLGFEEFKYLWNNIK
KWQGIYKQFDADQSGMIGADELPKAFQAAGFPLNDQLFQLIIRRYSDEKGNMDFDNYIGC
LVRLDAMCRAFKTLDKDGNGTIKVNIKEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtttctggcgaagaagctgattggtggactcatcgatgtggtcagcaacatcgatccc
ggccagttcgtgccctccgaacctcctcctgctcgcagaccattggcgtacgtccaggct
aacgagaacgatgaggagcgacagttccgtaaagtgttccagcagctcgctggcgatgac
atggaggtgagccccactgagctgatgaacatcctcaacaaaatcatctccaaacgtggc
gacctgaagacagatggcttctctatcgagtcctgcaggagtatggtggccgtcatggac
agcgacagcacaggcagactggggttcgaagagttcaaatacctctggaacaacatcaag
aagtggcagggcatctataagcagtttgatgctgatcagtccggcatgatcggcgcagac
gagctgcccaaagcattccaagctgcaggcttccccctgaacgaccagctcttccagctg
atcatccgcaggtacagcgacgagaagggcaacatggacttcgataactacatcggctgc
ctggtccgtctggacgccatgtgccgtgcttttaagacgctggacaaagacggcaacggc
accatcaaagtcaacatcaaagagtggctgcagctgaccatgtactcctga
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