Ictalurus punctatus (channel catfish): 108260034
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Entry
108260034 CDS
T04658
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 isoform X2
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
108260034
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ipu01003
]
108260034
Enzymes [BR:
ipu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
108260034
Glycosyltransferases [BR:
ipu01003
]
Glycan extension
FORS blood group (Forssman antigen)
108260034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
108260034
NCBI-ProteinID:
XP_017315442
UniProt:
A0A2D0QAW6
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All DBs
Position
28:1356549..1360325
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AA seq
311 aa
AA seq
DB search
MRKVTMRFGENFYLFSIIVIVSLLGLVYLSFTSSKSSRPDVATTTLWLAPIVWEGTFDQK
LIDNIYKPRNITVATTVFAVGKYVRFLKDFLESAEQHFMVGYRVHYYLFTDRPDEVPTVT
LGEGRQLTVIKTETSNRWQEISLRRMERIEKLIEKELTGKADYIFSLDVDSKFYAHWGAE
SLGDLVGVLHAWYFGSSRNHFPYERRPESQAFIPFEEGDYYYGGAVIGGHLDEVHKLAKT
CRMQLDVDRANHIEAIWQEESHLNKYFLYNKPSKALSPEYLWDDTKWKRSYLKVVRFSQV
VKNYANIRPNP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaagtcacaatgcggttcggagagaacttctatctgttttcgatcattgtcatc
gtttcactgctggggttagtataccttagcttcacttcttcaaaaagcagtcggccagat
gttgccacaacgaccctatggttggctccaattgtgtgggagggaacatttgatcagaag
ttgattgacaacatctacaaaccacggaatatcaccgtggcaaccaccgtctttgcagtg
gggaagtacgtacgcttcctgaaggacttcctggaatctgcagagcagcacttcatggtg
ggctaccgagtgcattactacctgtttacagatcgtccggacgaggttcccacggtaaca
ctgggggaagggcgtcagttgactgtgataaaaacagaaacctcgaaccgctggcaggaa
atctcactgcgcaggatggagagaatcgagaagctcatcgaaaaggaactcaccggcaag
gcagactacatattcagtctcgacgtcgactccaaattctatgctcactggggggcggag
tctctgggcgaccttgtcggtgtgctgcatgcctggtatttcggatcatctcggaatcat
ttcccatacgagcggcgtcctgaatctcaggccttcataccttttgaagaaggagactac
tactacggaggggccgtgatcggaggacacctcgacgaagtgcacaagctggcgaagacg
tgccgcatgcagctggatgtggaccgagccaatcacattgaagcaatatggcaggaggag
tctcacctgaacaagtacttcctgtacaataagcccagcaaggcgctctcacctgaatac
ctgtgggacgacacaaaatggaaacgcagctacttgaaagtggtgcgtttctctcaggtg
gtcaagaattacgccaacatccgacccaacccttaa
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